RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TCP1P17987 556 aaKnown RBP13.3□□□□□ -0.28
TRAF4-212ENST00000498540 LOXP28300 417 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-212ENST00000498540 SRD5A2P31213 254 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 SPRP35270 261 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-212ENST00000498540 CD79BP40259 229 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 PTH2RP49190 550 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 GPX6P59796 221 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 EEF1A1P68104 462 aaKnown RBP13.3□□□□□ -0.28
TRAF4-212ENST00000498540 IRF9Q00978 393 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 HMGCS1Q01581 520 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 GTF2H2Q13888 395 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 EEF1A1P5Q5VTE0 462 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 GTF2H2CQ6P1K8 395 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 SCIMPQ6UWF3 145 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 C20orf204Q6ZNR8 217 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 ZNF550Q7Z398 422 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 GOLGA7Q7Z5G4 137 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 BTLAQ7Z6A9 289 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 CREG2Q8IUH2 290 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 CTAGE3PQ8IX95 158 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 CENPLQ8N0S6 344 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-212ENST00000498540 CNEP1R1Q8N9A8 125 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 L3MBTL4Q8NA19 623 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 KCTD4Q8WVF5 259 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 SFXN2Q96NB2 322 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 CDK15Q96Q40 435 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 GSX2Q9BZM3 304 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 OPN3Q9H1Y3 402 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-212ENST00000498540 IPPKQ9H8X2 491 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 PSD3Q9NYI0 1048 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 HEY2Q9UBP5 337 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 ZNF639Q9UID6 485 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 PLLPQ9Y342 182 aa13.3□□□□□ -0.28
TRAF4-212ENST00000498540 CHD3Q12873 2000 aaKnown RBP13.3□□□□□ -0.28
TRAF4-212ENST00000498540 SYCE1LA8MT33 242 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 ACOX3O15254 700 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 SIX3O95343 332 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-212ENST00000498540 CNOT4O95628 575 aaKnown RBP13.29□□□□□ -0.28
TRAF4-212ENST00000498540 CBX7O95931 251 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 GFAPP14136 432 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 UGT2B10P36537 528 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 FEN1P39748 380 aaKnown RBP13.29□□□□□ -0.28
TRAF4-212ENST00000498540 PCYT1AP49585 367 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 ALDH18A1P54886 795 aaKnown RBP13.29□□□□□ -0.28
TRAF4-212ENST00000498540 MRPS25P82663 173 aaKnown RBP13.29□□□□□ -0.28
TRAF4-212ENST00000498540 DUSP2Q05923 314 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 MAP4K2Q12851 820 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 GRTP1Q5TC63 336 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 AAGABQ6PD74 315 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 C3orf62Q6ZUJ4 267 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 C22orf34Q6ZV56 151 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 P4HA3Q7Z4N8 544 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 PLCZ1Q86YW0 608 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 PPM1NQ8N819 430 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 ADCY4Q8NFM4 1077 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 PGM2Q96G03 612 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 ZC3HAV1LQ96H79 300 aaKnown RBP13.29□□□□□ -0.28
TRAF4-212ENST00000498540 SERPINI1Q99574 410 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 MRPL1Q9BYD6 325 aaKnown RBP13.29□□□□□ -0.28
TRAF4-212ENST00000498540 CES1P1Q9UKY3 287 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 CFL2Q9Y281 166 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 ROS1P08922 2347 aa13.29□□□□□ -0.28
TRAF4-212ENST00000498540 MXRA5Q9NR99 2828 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 SONP18583 2426 aaKnown RBP13.28□□□□□ -0.28
TRAF4-212ENST00000498540 SLC22A20A6NK97 555 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 C17orf51A8MQB3 221 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 ATP1B1P05026 303 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 CRHP06850 196 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 POU2F1P14859 743 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 CRABP2P29373 138 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 KIR2DL2P43627 348 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-212ENST00000498540 EMDP50402 254 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 SIRPAP78324 504 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 LTB4RQ15722 352 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 TRMT12Q53H54 448 aaKnown RBP13.28□□□□□ -0.28
TRAF4-212ENST00000498540 CCNYL2Q5T2Q4 361 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 OR5M10Q6IEU7 315 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 FAM180BQ6P0A1 224 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 SLC48A1Q6P1K1 146 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 CYS1Q717R9 158 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 OR52B6Q8NGF0 335 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 OR52R1Q8NGF1 315 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 RHEBL1Q8TAI7 183 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 IGFBPL1Q8WX77 278 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 NANOS1Q8WY41 292 aaKnown RBP13.28□□□□□ -0.28
TRAF4-212ENST00000498540 TMBIM1Q969X1 311 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 DKKL1Q9UK85 242 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 ADAM29Q9UKF5 820 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 PCDHA9Q9Y5H5 950 aa13.28□□□□□ -0.28
TRAF4-212ENST00000498540 USF3Q68DE3 2245 aa13.27□□□□□ -0.28
TRAF4-212ENST00000498540 FRG2CA6NGY1 282 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 GOLGA6L10A6NI86 522 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 OR6C70A6NIJ9 312 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 OR7A17O14581 309 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 TO15178 435 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 ZIC3O60481 467 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 ERAL1O75616 437 aaKnown RBP13.27□□□□□ -0.29
TRAF4-212ENST00000498540 CLDN9O95484 217 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 NID1P14543 1247 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 PCSK2P16519 638 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms