RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 C2orf72A6NCS6 295 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 FAM47E-STBD1D6RA91 191 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 STX16-NPEPL1H3BU86 382 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 STX16O14662 325 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 PLIN3O60664 434 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 SNX4O95219 450 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 PROCP04070 461 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 TSPAN8P19075 237 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 PTPN6P29350 595 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 TIMP3P35625 211 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 ARL1P40616 181 aaPredicted RBP16.92■□□□□ 0.3
PRKCB-209ENST00000498058 ASCL1P50553 236 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 AGFG1P52594 562 aaKnown RBP16.92■□□□□ 0.3
PRKCB-209ENST00000498058 FBXL19-AS1Q494R0 122 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 CCNYL2Q5T2Q4 361 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 COMMD6Q7Z4G1 85 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 SLC22A9Q8IVM8 553 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 TMEM151AQ8N4L1 468 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 TM4SF18Q96CE8 201 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 TMEM41AQ96HV5 264 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 SECISBP2Q96T21 854 aaKnown RBP16.92■□□□□ 0.3
PRKCB-209ENST00000498058 FOXC2Q99958 501 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 ITPAQ9BY32 194 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 MAT2BQ9NZL9 334 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 ZNF639Q9UID6 485 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 ST6GALNAC2Q9UJ37 374 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 ADAM29Q9UKF5 820 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 CBLCQ9ULV8 474 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 CAMK2AQ9UQM7 478 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 ABCA4P78363 2273 aa16.92■□□□□ 0.3
PRKCB-209ENST00000498058 TMEM120BA0PK00 339 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 CAPN14A8MX76 684 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 PDYNP01213 254 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 RPS17P08708 135 aaKnown RBP16.91■□□□□ 0.3
PRKCB-209ENST00000498058 MYL2P10916 166 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 CREB1P16220 341 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 PORP16435 677 aaPredicted RBP16.91■□□□□ 0.3
PRKCB-209ENST00000498058 ATP5F1P24539 256 aaPredicted RBP16.91■□□□□ 0.3
PRKCB-209ENST00000498058 FEN1P39748 380 aaKnown RBP16.91■□□□□ 0.3
PRKCB-209ENST00000498058 NAGLUP54802 743 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 CDH13P55290 713 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 NHSL2Q5HYW2 709 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 NSUN5P2Q63ZY6 315 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 TIGD3Q6B0B8 471 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 TTC19Q6DKK2 380 aaPredicted RBP16.91■□□□□ 0.3
PRKCB-209ENST00000498058 SLC48A1Q6P1K1 146 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 LETMD1Q6P1Q0 360 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 PLXDC2Q6UX71 529 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 YRDCQ86U90 279 aaKnown RBP16.91■□□□□ 0.3
PRKCB-209ENST00000498058 CDC20BQ86Y33 519 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 LACC1Q8IV20 430 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 C17orf47Q8NEP4 570 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 ADCY4Q8NFM4 1077 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 OR7G1Q8NGA0 311 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 RNASE6Q93091 150 aaKnown RBP16.91■□□□□ 0.3
PRKCB-209ENST00000498058 FAM111AQ96PZ2 611 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 CLEC4MQ9H2X3 399 aaPredicted RBP16.91■□□□□ 0.3
PRKCB-209ENST00000498058 PLEKHA6Q9Y2H5 1048 aa16.91■□□□□ 0.3
PRKCB-209ENST00000498058 A6NNC1 897 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 DVL2O14641 736 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 NME6O75414 186 aaPredicted RBP16.9■□□□□ 0.3
PRKCB-209ENST00000498058 PPM1BO75688 479 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 CBX7O95931 251 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 CPA3P15088 417 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 MASP1P48740 699 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 MAPK12P53778 367 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 MAP4K2Q12851 820 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 LTB4RQ15722 352 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 CEBPEQ15744 281 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 GGTA1PQ4G0N0 100 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 FLYWCH1Q4VC44 716 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 TRMT12Q53H54 448 aaKnown RBP16.9■□□□□ 0.3
PRKCB-209ENST00000498058 TCHHL1Q5QJ38 904 aaPredicted RBP16.9■□□□□ 0.3
PRKCB-209ENST00000498058 HHATQ5VTY9 493 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 ANGPTL8Q6UXH0 198 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 ZYG11AQ6WRX3 759 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 MILR1Q7Z6M3 343 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 PACS2Q86VP3 889 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 VWA5B2Q8N398 1253 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 ARFGAP2Q8N6H7 521 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 C9orf106Q8NAJ2 232 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 FAM83FQ8NEG4 500 aaPredicted RBP16.9■□□□□ 0.3
PRKCB-209ENST00000498058 ZNF483Q8TF39 744 aaPredicted RBP16.9■□□□□ 0.3
PRKCB-209ENST00000498058 NINJ1Q92982 152 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 CTHRC1Q96CG8 243 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 CNRIP1Q96F85 164 aaPredicted RBP16.9■□□□□ 0.3
PRKCB-209ENST00000498058 ZNF681Q96N22 645 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 TRIB1Q96RU8 372 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 HBEGFQ99075 208 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 BRINP2Q9C0B6 783 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 ANKRA2Q9H9E1 313 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 GALNT9Q9HCQ5 603 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 EHD3Q9NZN3 535 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 ZNF629Q9UEG4 869 aaPredicted RBP16.9■□□□□ 0.3
PRKCB-209ENST00000498058 EMCNQ9ULC0 261 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 SLC12A4Q9UP95 1085 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 MED12LQ86YW9 2145 aa16.9■□□□□ 0.3
PRKCB-209ENST00000498058 MBD3L4A6NDZ8 208 aaPredicted RBP16.89■□□□□ 0.29
PRKCB-209ENST00000498058 MBD3L3A6NE82 208 aaPredicted RBP16.89■□□□□ 0.29
PRKCB-209ENST00000498058 MBD3L5A6NJ08 208 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms