RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CRATP43155 626 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 RFX3P48380 749 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 CCL11P51671 97 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 NR0B1P51843 470 aaKnown RBP12.57□□□□□ -0.4
CPNE1-227ENST00000498056 SELPLGQ14242 412 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 COX20Q5RI15 118 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 B3GNTL1Q67FW5 361 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-227ENST00000498056 TCTN3Q6NUS6 607 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 JMJD6Q6NYC1 403 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-227ENST00000498056 CDC73Q6P1J9 531 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 BORAQ6PGQ7 559 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 C16orf47Q6ZP98 133 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-227ENST00000498056 SLC44A2Q8IWA5 706 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-227ENST00000498056 COX18Q8N8Q8 333 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 OR5L2Q8NGL0 311 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 OR8K3Q8NH51 312 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 NUBPLQ8TB37 319 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 ADAMTS15Q8TE58 950 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 CDS1Q92903 461 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 CRELD1Q96HD1 420 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 NSL1Q96IY1 281 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 VSTM2LQ96N03 204 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 ANKRD27Q96NW4 1050 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 PHF12Q96QT6 1004 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 OR7D2Q96RA2 312 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 ACTRT3Q9BYD9 372 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 NXF5Q9H1B4 397 aaKnown RBP12.57□□□□□ -0.4
CPNE1-227ENST00000498056 RAD21L1Q9H4I0 556 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 Q9N2J8 555 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 NTMQ9P121 344 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 CORO2BQ9UQ03 480 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 OR10H1Q9Y4A9 318 aa12.57□□□□□ -0.4
CPNE1-227ENST00000498056 TPRP12270 2363 aaKnown RBP12.57□□□□□ -0.4
CPNE1-227ENST00000498056 C15orf38-AP3S2A0A0A6YYH1 394 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 FRG2CA6NGY1 282 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 EVPLLA8MZ36 301 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 ITGA10O75578 1167 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 UNC5CO95185 931 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 MATN1P21941 496 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 ST13P50502 369 aaKnown RBP12.56□□□□□ -0.4
CPNE1-227ENST00000498056 ANXA11P50995 505 aaKnown RBP12.56□□□□□ -0.4
CPNE1-227ENST00000498056 PLCXD2Q0VAA5 305 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 DUSP5Q16690 384 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 CYP51A1Q16850 503 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 NPSR1Q6W5P4 371 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 ARPINQ7Z6K5 226 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 PRR22Q8IZ63 422 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 LGI4Q8N135 537 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 HORMAD2Q8N7B1 307 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 OR52N2Q8NGI0 321 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 FBXO27Q8NI29 283 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 SLC22A8Q8TCC7 542 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 GPR151Q8TDV0 419 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 APOBEC4Q8WW27 367 aaKnown RBP12.56□□□□□ -0.4
CPNE1-227ENST00000498056 PIK3R3Q92569 461 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 RMND5BQ96G75 393 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-227ENST00000498056 LCORQ96JN0 433 aaPredicted RBP12.56□□□□□ -0.4
CPNE1-227ENST00000498056 CNTNAP3BQ96NU0 1288 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 BTBD9Q96Q07 612 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 LMF2Q9BU23 707 aaKnown RBP12.56□□□□□ -0.4
CPNE1-227ENST00000498056 THUMPD3Q9BV44 507 aaKnown RBP12.56□□□□□ -0.4
CPNE1-227ENST00000498056 CNTNAP3Q9BZ76 1288 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 IKZF5Q9H5V7 419 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 EPS8L2Q9H6S3 715 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 ABI3Q9P2A4 366 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 TEKT2Q9UIF3 430 aa12.56□□□□□ -0.4
CPNE1-227ENST00000498056 NINQ8N4C6 2090 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 LOC400499M0QZD8 3231 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 EBAG9O00559 213 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 MAN1A2O60476 641 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 OR2J2O76002 312 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 NPPAP01160 153 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 ETFAP13804 333 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 GABRA3P34903 492 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 KRT20P35900 424 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 MNAT1P51948 309 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 SLC7A2P52569 658 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 NRG3P56975 720 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 DSTNP60981 165 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 DCAF7P61962 342 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 HPCAP84074 193 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 SLC25A3Q00325 362 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 PSG6Q00889 435 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 MEP1AQ16819 746 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 RUNDC3AQ59EK9 446 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 RABL3Q5HYI8 236 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 ABHD17BQ5VST6 288 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 C16orf89Q6UX73 402 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 HACD2Q6Y1H2 254 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 LINC00696Q6ZRV3 163 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 C16orf62Q7Z3J2 963 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 GALNT10Q86SR1 603 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 RPS19BP1Q86WX3 136 aaKnown RBP12.55□□□□□ -0.4
CPNE1-227ENST00000498056 APLFQ8IW19 511 aaPredicted RBP12.55□□□□□ -0.4
CPNE1-227ENST00000498056 TAGAPQ8N103 731 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 ZNF441Q8N8Z8 693 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 SLC16A11Q8NCK7 471 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 FDCSPQ8NFU4 85 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 OR8J3Q8NGG0 315 aa12.55□□□□□ -0.4
CPNE1-227ENST00000498056 RAB8BQ92930 207 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms