RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 UTP20O75691 2785 aaKnown RBP14.11□□□□□ -0.15
NUP50-219ENST00000497960 NINQ8N4C6 2090 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 EDF1O60869 148 aaKnown RBP14.1□□□□□ -0.15
NUP50-219ENST00000497960 VIMP08670 466 aaKnown RBP14.1□□□□□ -0.15
NUP50-219ENST00000497960 AGAP20933 346 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 S1PR1P21453 382 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 GPX3P22352 226 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 MAGEA5P43359 124 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 ADORA2A-AS1P86434 159 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 MGAT2Q10469 447 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 MAD2L1Q13257 205 aaPredicted RBP14.1□□□□□ -0.15
NUP50-219ENST00000497960 SLC10A1Q14973 349 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 RPS6KA2Q15349 733 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 TBCELQ5QJ74 424 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 NOXRED1Q6NXP6 359 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 FAM180BQ6P0A1 224 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 TMEM64Q6YI46 380 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 C3P1Q6ZMU1 363 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 CCDC116Q8IYX3 515 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 PHF10Q8WUB8 498 aaKnown RBP14.1□□□□□ -0.15
NUP50-219ENST00000497960 DIO2Q92813 273 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 EXOSC8Q96B26 276 aaKnown RBP14.1□□□□□ -0.15
NUP50-219ENST00000497960 JSRP1Q96MG2 331 aaPredicted RBP14.1□□□□□ -0.15
NUP50-219ENST00000497960 ZNF681Q96N22 645 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 DOHHQ9BU89 302 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 CCDC134Q9H6E4 229 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 LDAHQ9H6V9 325 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 ZFP64Q9NPA5 681 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 EHD3Q9NZN3 535 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 PRODH2Q9UF12 536 aa14.1□□□□□ -0.15
NUP50-219ENST00000497960 CNOT11Q9UKZ1 510 aaKnown RBP14.1□□□□□ -0.15
NUP50-219ENST00000497960 CHCHD2Q9Y6H1 151 aaPredicted RBP14.1□□□□□ -0.15
NUP50-219ENST00000497960 GOLGA8QA0A0J9YX86 632 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 GOLGA8OA6NCC3 632 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 GOLGA8NF8WBI6 632 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 SDHDO14521 159 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 DIAPH2O60879 1101 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 BCAS2O75934 225 aaPredicted RBP14.09□□□□□ -0.15
NUP50-219ENST00000497960 IGHG3P01860 377 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 PCSK2P16519 638 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 SDC1P18827 310 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 EPHA3P29320 983 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 FBXW4P57775 412 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 EXOSC7Q15024 291 aaKnown RBP14.09□□□□□ -0.15
NUP50-219ENST00000497960 LTB4RQ15722 352 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 RFTN2Q52LD8 501 aaPredicted RBP14.09□□□□□ -0.15
NUP50-219ENST00000497960 C6orf136Q5SQH8 315 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 SP5Q6BEB4 398 aaPredicted RBP14.09□□□□□ -0.15
NUP50-219ENST00000497960 NXNQ6DKJ4 435 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 TRILQ7L0X0 811 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 MAVSQ7Z434 540 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 OR52R1Q8NGF1 315 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 ZNF675Q8TD23 568 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 CTHRC1Q96CG8 243 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 ERP27Q96DN0 273 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 C11orf24Q96F05 449 aaPredicted RBP14.09□□□□□ -0.15
NUP50-219ENST00000497960 FCRL1Q96LA6 429 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 SECISBP2Q96T21 854 aaKnown RBP14.09□□□□□ -0.15
NUP50-219ENST00000497960 NXF5Q9H1B4 397 aaKnown RBP14.09□□□□□ -0.15
NUP50-219ENST00000497960 TP63Q9H3D4 680 aaPredicted RBP14.09□□□□□ -0.15
NUP50-219ENST00000497960 EXO5Q9H790 373 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 AKTIPQ9H8T0 292 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 MYNNQ9NPC7 610 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 SLC35C2Q9NQQ7 365 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 B4GALT7Q9UBV7 327 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 ZNF639Q9UID6 485 aa14.09□□□□□ -0.15
NUP50-219ENST00000497960 WBP11Q9Y2W2 641 aaKnown RBP14.09□□□□□ -0.15
NUP50-219ENST00000497960 ANKRD33BA6NCL7 494 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 OR14I1A6ND48 311 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 NPIPA2E9PIF3 369 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 NPIPA3F8WFD2 350 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 BCKDKO14874 412 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 CBX7O95931 251 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 TROVE2P10155 538 aaKnown RBP eCLIP14.08□□□□□ -0.16
NUP50-219ENST00000497960 NAGAP17050 411 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 LBPP18428 481 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 DDCP20711 480 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 ABCD3P28288 659 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 HTR1EP28566 365 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 MPIP34949 423 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 MAN2A2P49641 1150 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 DCAF7P61962 342 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 MRPS35P82673 323 aaKnown RBP14.08□□□□□ -0.16
NUP50-219ENST00000497960 DUSP2Q05923 314 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 C2orf80Q0P641 193 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 KIAA0040Q15053 153 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 SLC9B1Q4ZJI4 515 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 TRMT12Q53H54 448 aaKnown RBP14.08□□□□□ -0.16
NUP50-219ENST00000497960 TMEM198Q66K66 360 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 TMEM211Q6ICI0 200 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 ACAD11Q709F0 780 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 PRR22Q8IZ63 422 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 LIX1Q8N485 282 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 CLHC1Q8NHS4 586 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 SPPL2AQ8TCT8 520 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 HSPBAP1Q96EW2 488 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 THOC1Q96FV9 657 aaKnown RBP14.08□□□□□ -0.16
NUP50-219ENST00000497960 LCORQ96JN0 433 aaPredicted RBP14.08□□□□□ -0.16
NUP50-219ENST00000497960 TSSK3Q96PN8 268 aa14.08□□□□□ -0.16
NUP50-219ENST00000497960 BBS4Q96RK4 519 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms