RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 VAPBO95292 243 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 HPNP05981 417 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 PTMAP06454 111 aaKnown RBP6.87□□□□□ -1.31
VPS45-210ENST00000497638 SERPINA6P08185 405 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 CYP4B1P13584 511 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 NPPBP16860 134 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 HNF4AP41235 474 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 CDK9P50750 372 aaKnown RBP6.87□□□□□ -1.31
VPS45-210ENST00000497638 NR1H2P55055 460 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 RWDD2BP57060 319 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 RAB38P57729 211 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 ASPHQ12797 758 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 FOXF2Q12947 444 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 SP140Q13342 867 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 GAB1Q13480 694 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 CUL1Q13616 776 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 RCN2Q14257 317 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 IQCB1Q15051 598 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 LRRC8EQ6NSJ5 796 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 CYHR1Q6ZMK1 362 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 PIWIL4Q7Z3Z4 852 aaKnown RBP6.87□□□□□ -1.31
VPS45-210ENST00000497638 LILRB2Q8N423 598 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 SLC15A4Q8N697 577 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 SLC35B2Q8TB61 432 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 SLC2A12Q8TD20 617 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 PTPMT1Q8WUK0 201 aaPredicted RBP6.87□□□□□ -1.31
VPS45-210ENST00000497638 SREK1Q8WXA9 508 aaKnown RBP6.87□□□□□ -1.31
VPS45-210ENST00000497638 ROBO4Q8WZ75 1007 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 ST8SIA2Q92186 375 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 KCNJ9Q92806 393 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 ZBED6CLQ96FA7 236 aaPredicted RBP6.87□□□□□ -1.31
VPS45-210ENST00000497638 WDYHV1Q96HA8 205 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 MARK4Q96L34 752 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 WFIKKN1Q96NZ8 548 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 UGT2B28Q9BY64 529 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 NHEJ1Q9H9Q4 299 aaPredicted RBP6.87□□□□□ -1.31
VPS45-210ENST00000497638 PROK2Q9HC23 129 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 INTS10Q9NVR2 710 aaKnown RBP6.87□□□□□ -1.31
VPS45-210ENST00000497638 KLHL28Q9NXS3 571 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 LPAR3Q9UBY5 353 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 PCDHA13Q9Y5I0 950 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 TNPO3Q9Y5L0 923 aaKnown RBP6.87□□□□□ -1.31
VPS45-210ENST00000497638 CHCHD2Q9Y6H1 151 aaPredicted RBP6.87□□□□□ -1.31
VPS45-210ENST00000497638 MEGF8Q7Z7M0 2845 aa6.87□□□□□ -1.31
VPS45-210ENST00000497638 A0A088AWK7 358 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 C17orf105B2RV13 164 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 C4orf51C9J302 202 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 AP3B1O00203 1094 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 TRIM3O75382 744 aaPredicted RBP6.86□□□□□ -1.31
VPS45-210ENST00000497638 TRAPPC6AO75865 159 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 C8GP07360 202 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 APRTP07741 180 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 HK1P19367 917 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 ZNF10P21506 573 aaPredicted RBP6.86□□□□□ -1.31
VPS45-210ENST00000497638 LOXP28300 417 aaPredicted RBP6.86□□□□□ -1.31
VPS45-210ENST00000497638 NMBRP28336 390 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 SERPINB3P29508 390 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 STIP1P31948 543 aaKnown RBP6.86□□□□□ -1.31
VPS45-210ENST00000497638 IDUAP35475 653 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 GCKP35557 465 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 CD79BP40259 229 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 HNRNPFP52597 415 aaKnown RBP6.86□□□□□ -1.31
VPS45-210ENST00000497638 MTTPP55157 894 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 STXBP1P61764 594 aaKnown RBP6.86□□□□□ -1.31
VPS45-210ENST00000497638 REEP5Q00765 189 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 CTBP1Q13363 440 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 SERTAD2Q14140 314 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 EFTUD2Q15029 972 aaKnown RBP eCLIP6.86□□□□□ -1.31
VPS45-210ENST00000497638 TOR1AIP1Q5JTV8 583 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 DCST1Q5T197 706 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 MBNL2Q5VZF2 373 aaKnown RBP6.86□□□□□ -1.31
VPS45-210ENST00000497638 MBOAT1Q6ZNC8 495 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 CLEC17AQ6ZS10 378 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 CLNKQ7Z7G1 428 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 ZNF321PQ8N8H1 164 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 FAM47BQ8NA70 645 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 C7orf57Q8NEG2 295 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 OR10G3Q8NGC4 313 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 CAVIN3Q969G5 261 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 ABTB1Q969K4 478 aaPredicted RBP6.86□□□□□ -1.31
VPS45-210ENST00000497638 INTS12Q96CB8 462 aaKnown RBP6.86□□□□□ -1.31
VPS45-210ENST00000497638 SNF8Q96H20 258 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 FAR2Q96K12 515 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 RUNDC3BQ96NL0 473 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 CHP1Q99653 195 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 CCDC68Q9H2F9 335 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 UBQLN3Q9H347 655 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 PARVBQ9HBI1 364 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 HOMER3Q9NSC5 361 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 TMEM160Q9NX00 188 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 BFARQ9NZS9 450 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 PDE10AQ9Y233 779 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 C15orf41Q9Y2V0 281 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 MED16Q9Y2X0 877 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 SLC6A5Q9Y345 797 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 DHRS7Q9Y394 339 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 FREM1Q5H8C1 2179 aa6.86□□□□□ -1.31
VPS45-210ENST00000497638 BTNL10A8MVZ5 291 aa6.85□□□□□ -1.31
VPS45-210ENST00000497638 GOLGA8KD6RF30 607 aa6.85□□□□□ -1.31
VPS45-210ENST00000497638 GOLGA8TH3BQL2 631 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms