RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 TAF6P49848 677 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 PRELPP51888 382 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 NAPAP54920 295 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 VCPP55072 806 aaKnown RBP3.24□□□□□ -1.89
SMC4-225ENST00000497203 TRA2BP62995 288 aaKnown RBP3.24□□□□□ -1.89
SMC4-225ENST00000497203 CD226Q15762 336 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 CCL14Q16627 93 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 LINC00242Q5T6M2 205 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 LEG1Q6P5S2 330 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 ZNF841Q6ZN19 808 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 NET1Q7Z628 596 aaPredicted RBP3.24□□□□□ -1.89
SMC4-225ENST00000497203 TSEN54Q7Z6J9 526 aaKnown RBP3.24□□□□□ -1.89
SMC4-225ENST00000497203 CCDC36Q8IYA8 594 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 Q8N377 158 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 CSNK1G2-AS1Q8NCQ2 148 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 RASL10AQ92737 203 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 DLX4Q92988 240 aaPredicted RBP3.24□□□□□ -1.89
SMC4-225ENST00000497203 GPA33Q99795 319 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 FAM173AQ9BQD7 235 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 CCDC28BQ9BUN5 200 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 CCSER1Q9C0I3 900 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 PNNQ9H307 717 aaKnown RBP3.24□□□□□ -1.89
SMC4-225ENST00000497203 TSPY26PQ9H489 355 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 RNF41Q9H4P4 317 aaPredicted RBP3.24□□□□□ -1.89
SMC4-225ENST00000497203 COG4Q9H9E3 785 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 LIN28AQ9H9Z2 209 aaKnown RBP3.24□□□□□ -1.89
SMC4-225ENST00000497203 AMBNQ9NP70 447 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 YAE1D1Q9NRH1 226 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 CENPMQ9NSP4 180 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 SENP1Q9P0U3 644 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 ATP6V1HQ9UI12 483 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 CHMP2BQ9UQN3 213 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 AP1M2Q9Y6Q5 423 aa3.24□□□□□ -1.89
SMC4-225ENST00000497203 TTC26A0AVF1 554 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 WASH3PC4AMC7 463 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 K7EPI3 171 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 ALOX15BO15296 676 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 CHADO15335 359 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 DIRAS3O95661 229 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 APBB3O95704 486 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 GUCA1CO95843 209 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 AK1P00568 194 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 ANXA4P09525 319 aaPredicted RBP3.23□□□□□ -1.89
SMC4-225ENST00000497203 CYP11B1P15538 503 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 MDH1P40925 334 aaKnown RBP3.23□□□□□ -1.89
SMC4-225ENST00000497203 ETV5P41161 510 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 MFAP2P55001 183 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 MRPS6P82932 125 aaKnown RBP3.23□□□□□ -1.89
SMC4-225ENST00000497203 CD300CQ08708 224 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 ZP4Q12836 540 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 EIF2B1Q14232 305 aaKnown RBP3.23□□□□□ -1.89
SMC4-225ENST00000497203 ZKSCAN8Q15776 578 aaPredicted RBP3.23□□□□□ -1.89
SMC4-225ENST00000497203 PCK2Q16822 640 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 CNPY1Q3B7I2 92 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 ADPRMQ3LIE5 342 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 ZNF506Q5JVG8 444 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 ACER2Q5QJU3 275 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 BEND6Q5SZJ8 279 aaPredicted RBP3.23□□□□□ -1.89
SMC4-225ENST00000497203 RIPPLY2Q5TAB7 128 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 DMKNQ6E0U4 476 aaPredicted RBP3.23□□□□□ -1.89
SMC4-225ENST00000497203 WASH2PQ6VEQ5 465 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 C17orf47Q8NEP4 570 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 OR52J3Q8NH60 311 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 FLVCR1-AS1Q8TAF5 88 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 TTYH2Q9BSA4 534 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 THUMPD2Q9BTF0 503 aaKnown RBP3.23□□□□□ -1.89
SMC4-225ENST00000497203 CARD6Q9BX69 1037 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 TRIM9Q9C026 710 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 TRIM6Q9C030 488 aaPredicted RBP3.23□□□□□ -1.89
SMC4-225ENST00000497203 PCNX3Q9H6A9 2034 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 LPAR2Q9HBW0 351 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 TRPV5Q9NQA5 729 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 RAI14Q9P0K7 980 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 MBD2Q9UBB5 411 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 GHRLQ9UBU3 117 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 MLXQ9UH92 298 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 SH3BGRL2Q9UJC5 107 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 ZNF346Q9UL40 294 aaKnown RBP3.23□□□□□ -1.89
SMC4-225ENST00000497203 FOXJ3Q9UPW0 622 aa3.23□□□□□ -1.89
SMC4-225ENST00000497203 A0A1W2PPR1 153 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 RNF222A6NCQ9 220 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 FBLL1A6NHQ2 334 aaKnown RBP3.22□□□□□ -1.89
SMC4-225ENST00000497203 RPL37AP8A6NKH3 93 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 TYROBPO43914 113 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 CRLF1O75462 422 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 TOXO94900 526 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 SEMA4FO95754 770 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 IGSF6O95976 241 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 IFNB1P01574 187 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 IGHV3-13P01766 116 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 CA3P07451 260 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 HOXD4P09016 255 aaPredicted RBP3.22□□□□□ -1.89
SMC4-225ENST00000497203 HOXB7P09629 217 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 CALCBP10092 127 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 THRBP10828 461 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 UQCRBP14927 111 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 PAICSP22234 425 aaKnown RBP3.22□□□□□ -1.89
SMC4-225ENST00000497203 CYP2F1P24903 491 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 RFC2P35250 354 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 ACAA2P42765 397 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms