RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 STXBP4Q6ZWJ1 553 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 LPCAT2Q7L5N7 544 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 GCNT2Q8N0V5 402 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 ARL14Q8N4G2 192 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 MCHR2Q969V1 340 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 SLC25A36Q96CQ1 311 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 VGLL1Q99990 258 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 RBM4BQ9BQ04 359 aaKnown RBP4.41□□□□□ -1.7
SSR3-208ENST00000496050 CCDC28BQ9BUN5 200 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 TSPY26PQ9H489 355 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 RIBC2Q9H4K1 309 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 KAT8Q9H7Z6 458 aaKnown RBP4.41□□□□□ -1.7
SSR3-208ENST00000496050 LPAR2Q9HBW0 351 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 POLD4Q9HCU8 107 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 FAM114A2Q9NRY5 505 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 ABCC13Q9NSE7 274 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 MBD2Q9UBB5 411 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 FOXJ3Q9UPW0 622 aa4.41□□□□□ -1.7
SSR3-208ENST00000496050 IGKV3D-15A0A087WSY6 115 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 A0A0U1RQV5 110 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 H3BMH7 237 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 ALOX15BO15296 676 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 IDH1O75874 414 aaKnown RBP4.4□□□□□ -1.71
SSR3-208ENST00000496050 TOXO94900 526 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 UQCRBP14927 111 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 KIF5BP33176 963 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 ADRA1AP35348 466 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 VEGFCP49767 419 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 CNPY1Q3B7I2 92 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 VWA2Q5GFL6 755 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 ZNF311Q5JNZ3 666 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 LINC00242Q5T6M2 205 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 RIPPLY2Q5TAB7 128 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 SEL1L3Q68CR1 1132 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 DMKNQ6E0U4 476 aaPredicted RBP4.4□□□□□ -1.71
SSR3-208ENST00000496050 LEG1Q6P5S2 330 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 Q7L0L9 218 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 TSEN54Q7Z6J9 526 aaKnown RBP4.4□□□□□ -1.71
SSR3-208ENST00000496050 ZNF689Q96CS4 500 aaPredicted RBP4.4□□□□□ -1.71
SSR3-208ENST00000496050 NTNG2Q96CW9 530 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 VSTM2LQ96N03 204 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 ZNF346Q9UL40 294 aaKnown RBP4.4□□□□□ -1.71
SSR3-208ENST00000496050 MFHAS1Q9Y4C4 1052 aa4.4□□□□□ -1.71
SSR3-208ENST00000496050 KLF2Q9Y5W3 355 aaPredicted RBP4.4□□□□□ -1.71
SSR3-208ENST00000496050 A0A1B0GWJ7 208 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 RNF222A6NCQ9 220 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 IMPA2O14732 288 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 OR4F21O95013 312 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 SEMA4FO95754 770 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 HCKP08631 526 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 THRBP10828 461 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 RFC2P35250 354 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 PTGFRP43088 359 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 BRCC3P46736 316 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 HTR5AP47898 357 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 GSK3BP49841 420 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 ZP4Q12836 540 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 EXOSC2Q13868 293 aaKnown RBP4.39□□□□□ -1.71
SSR3-208ENST00000496050 EIF2B1Q14232 305 aaKnown RBP4.39□□□□□ -1.71
SSR3-208ENST00000496050 TAF7Q15545 349 aaPredicted RBP4.39□□□□□ -1.71
SSR3-208ENST00000496050 TMEM44Q2T9K0 475 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 DCAF4L1Q3SXM0 396 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 GLIPR1L2Q4G1C9 344 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 PRR5LQ6MZQ0 368 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 ZNF343Q6P1L6 599 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 PAQR6Q6TCH4 344 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 ZNF562Q6V9R5 426 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 CENPUQ71F23 418 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 ZNF573Q86YE8 665 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 CBWD2Q8IUF1 395 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 CENPLQ8N0S6 344 aaPredicted RBP4.39□□□□□ -1.71
SSR3-208ENST00000496050 CSNK1G2-AS1Q8NCQ2 148 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 OR4F17Q8NGA8 305 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 ELMO2Q96JJ3 720 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 OR4F4Q96R69 305 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 TPPP3Q9BW30 176 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 ZNF416Q9BWM5 594 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 TRIM9Q9C026 710 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 PNNQ9H307 717 aaKnown RBP4.39□□□□□ -1.71
SSR3-208ENST00000496050 ESM1Q9NQ30 184 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 DCAF13Q9NV06 445 aaKnown RBP4.39□□□□□ -1.71
SSR3-208ENST00000496050 DUS2Q9NX74 493 aaKnown RBP4.39□□□□□ -1.71
SSR3-208ENST00000496050 TMOD2Q9NZR1 351 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 GRIN2DO15399 1336 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 KIF26BQ2KJY2 2108 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 CARMIL1Q5VZK9 1371 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 PARD3Q8TEW0 1356 aa4.39□□□□□ -1.71
SSR3-208ENST00000496050 IGHV3-16A0A0C4DH30 117 aa4.38□□□□□ -1.71
SSR3-208ENST00000496050 A0A1B0GUL7 405 aa4.38□□□□□ -1.71
SSR3-208ENST00000496050 WASHC1A8K0Z3 465 aa4.38□□□□□ -1.71
SSR3-208ENST00000496050 C11orf98E9PRG8 122 aa4.38□□□□□ -1.71
SSR3-208ENST00000496050 H0YL77 283 aa4.38□□□□□ -1.71
SSR3-208ENST00000496050 CPLX1O14810 134 aa4.38□□□□□ -1.71
SSR3-208ENST00000496050 MCF2LO15068 1137 aa4.38□□□□□ -1.71
SSR3-208ENST00000496050 MAPK13O15264 365 aa4.38□□□□□ -1.71
SSR3-208ENST00000496050 MFN2O95140 757 aa4.38□□□□□ -1.71
SSR3-208ENST00000496050 ZNF883P0CG24 379 aa4.38□□□□□ -1.71
SSR3-208ENST00000496050 HTR2AP28223 471 aa4.38□□□□□ -1.71
SSR3-208ENST00000496050 ETV5P41161 510 aa4.38□□□□□ -1.71
SSR3-208ENST00000496050 MFAP2P55001 183 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms