RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-240	ENST00000495293	BTN3A3	O00478	584 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	KLF11	O14901	512 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	PCDH17	O14917	1159 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	SLC16A5	O15375	505 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	DNPH1	O43598	174 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	TYROBP	O43914	113 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	RAD1	O60671	282 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	GLRA3	O75311	464 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	BANF1	O75531	89 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	SCRG1	O75711	98 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	STK17B	O94768	372 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	CCNDBP1	O95273	360 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	CBX6	O95503	412 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	C1orf105	O95561	183 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	STAMBP	O95630	424 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	C8G	P07360	202 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	CHRM5	P08912	532 aa	Predicted RBP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	FGF5	P12034	268 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	APEH	P13798	732 aa	Known RBP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ACADS	P16219	412 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	UGT2B7	P16662	529 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	HOXB6	P17509	224 aa	Known RBP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ATP6V1C1	P21283	382 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	BGN	P21810	368 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	CMPK1	P30085	196 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	SPR	P35270	261 aa	Predicted RBP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ETV5	P41161	510 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	KPNA2	P52292	529 aa	Known RBP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ALDH18A1	P54886	795 aa	Known RBP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	CASP6	P55212	293 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	GPX6	P59796	221 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	MC1R	Q01726	317 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	SLC34A1	Q06495	639 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	KLC1	Q07866	573 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ARHGAP19	Q14CB8	494 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	FASTKD3	Q14CZ7	662 aa	Known RBP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	CHI3L2	Q15782	390 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	SLC5A12	Q1EHB4	618 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	TRMT5	Q32P41	509 aa	Known RBP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ZNF260	Q3ZCT1	412 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ZNF658B	Q4V348	819 aa	Predicted RBP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ACSBG2	Q5FVE4	666 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ZNF789	Q5FWF6	425 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	UBAP2	Q5T6F2	1119 aa	Known RBP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	GRTP1	Q5TC63	336 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	FAM205BP	Q63HN1	556 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	STEAP4	Q687X5	459 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	C19orf48	Q6RUI8	117 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	SPESP1	Q6UW49	350 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ZNF517	Q6ZMY9	492 aa	Predicted RBP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	PTCHD4	Q6ZW05	846 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	FRA10AC1	Q70Z53	315 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	CYS1	Q717R9	158 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ZFAND4	Q86XD8	727 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	TMEM126B	Q8IUX1	230 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	CNTN4	Q8IWV2	1026 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	CPNE9	Q8IYJ1	553 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ADGRF3	Q8IZF5	1079 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	NRAC	Q8N912	160 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	OR9A1P	Q8NGU1	263 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	OR2L8	Q8NGY9	312 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	LKAAEAR1	Q8TD35	194 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	DCAKD	Q8WVC6	231 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ST8SIA4	Q92187	359 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ZUFSP	Q96AP4	578 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	CMTM5	Q96DZ9	223 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	SPDL1	Q96EA4	605 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	SLC41A2	Q96JW4	573 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	GBP5	Q96PP8	586 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	TRAPPC9	Q96Q05	1148 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	SERPINI1	Q99574	410 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	NDN	Q99608	321 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	PAIP1	Q9H074	479 aa	Known RBP	4.26	□□□□□ -1.73
RBM39-240	ENST00000495293		Q9H521	79 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	SLCO1B3	Q9NPD5	702 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	FGF21	Q9NSA1	209 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	THAP1	Q9NVV9	213 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	NKIRAS2	Q9NYR9	191 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	DCDC2	Q9UHG0	476 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	KCND3	Q9UK17	655 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	POMT2	Q9UKY4	750 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	PADI1	Q9ULC6	663 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	PLAGL1	Q9UM63	463 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	USP22	Q9UPT9	525 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	ICK	Q9UPZ9	632 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	KNTC1	P50748	2209 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293	NCOR2	Q9Y618	2525 aa		4.26	□□□□□ -1.73
RBM39-240	ENST00000495293		A0A1W2PNU3	283 aa	Predicted RBP	4.25	□□□□□ -1.73
RBM39-240	ENST00000495293		A0A1W2PRQ8	180 aa		4.25	□□□□□ -1.73
RBM39-240	ENST00000495293		A8MUI8	341 aa		4.25	□□□□□ -1.73
RBM39-240	ENST00000495293	TMEM150C	B9EJG8	249 aa		4.25	□□□□□ -1.73
RBM39-240	ENST00000495293		H7C1Q1	480 aa		4.25	□□□□□ -1.73
RBM39-240	ENST00000495293	PSMD9	O00233	223 aa		4.25	□□□□□ -1.73
RBM39-240	ENST00000495293	SMIM24	O75264	130 aa		4.25	□□□□□ -1.73
RBM39-240	ENST00000495293	FKBP6	O75344	327 aa		4.25	□□□□□ -1.73
RBM39-240	ENST00000495293	PSIP1	O75475	530 aa	Known RBP	4.25	□□□□□ -1.73
RBM39-240	ENST00000495293	OR2B3	O76000	313 aa		4.25	□□□□□ -1.73
RBM39-240	ENST00000495293	ENO1	P06733	434 aa	Known RBP	4.25	□□□□□ -1.73
RBM39-240	ENST00000495293	CD63	P08962	238 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms