RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 USP9XQ93008 2570 aaPredicted RBP7.48□□□□□ -1.21
RIF1-211ENST00000494333 A0A087WUV0 522 aaPredicted RBP7.48□□□□□ -1.21
RIF1-211ENST00000494333 TMEM200CA6NKL6 621 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 WASHC1A8K0Z3 465 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 C17orf105B2RV13 164 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 TRIM49D1C9J1S8 452 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 WWP2O00308 870 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 ZNHIT1O43257 154 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 UGDHO60701 494 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 SMIM24O75264 130 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 OR2J2O76002 312 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 TOX4O94842 621 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 SCELO95171 688 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 CLDN9O95484 217 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 ZNF24P17028 368 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 CNTFP26441 200 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 TLX1P31314 330 aaPredicted RBP7.48□□□□□ -1.21
RIF1-211ENST00000494333 CA7P43166 264 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 MAGEA12P43365 314 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 KIR2DL3P43628 341 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 SSR4P51571 173 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 CCNG1P51959 295 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 CASP6P55212 293 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 ADAM8P78325 824 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 PHEXP78562 749 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 LGSNQ5TDP6 509 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 C18orf63Q68DL7 685 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 METTL2BQ6P1Q9 378 aaKnown RBP7.48□□□□□ -1.21
RIF1-211ENST00000494333 IL20RBQ6UXL0 311 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 HSDL2Q6YN16 418 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 MDGA2Q7Z553 956 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 GLB1L2Q8IW92 636 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 CYP4Z2PQ8N1L4 340 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 CEP112Q8N8E3 955 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 ZNF321PQ8N8H1 164 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 PTGR2Q8N8N7 351 aaPredicted RBP7.48□□□□□ -1.21
RIF1-211ENST00000494333 L3MBTL4Q8NA19 623 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 MORN4Q8NDC4 146 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 C7orf57Q8NEG2 295 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 OR52B6Q8NGF0 335 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 OR14A16Q8NHC5 309 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 TSPEARQ8WU66 669 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 DCAKDQ8WVC6 231 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 PPWD1Q96BP3 646 aaKnown RBP7.48□□□□□ -1.21
RIF1-211ENST00000494333 REPS1Q96D71 796 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 GPHA2Q96T91 129 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 RPF2Q9H7B2 306 aaKnown RBP7.48□□□□□ -1.21
RIF1-211ENST00000494333 XPR1Q9UBH6 696 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 ZNF180Q9UJW8 692 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 ERVK-11Q9UQG0 969 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 KLF13Q9Y2Y9 288 aaPredicted RBP7.48□□□□□ -1.21
RIF1-211ENST00000494333 ATG4BQ9Y4P1 393 aa7.48□□□□□ -1.21
RIF1-211ENST00000494333 SCN2AQ99250 2005 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 USP9YO00507 2555 aaPredicted RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 EXOC1LA0A1B0GW35 172 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 A0A1W2PR48 441 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 A8MVJ9 347 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 STX16-NPEPL1H3BU86 382 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 FOXE1O00358 373 aaPredicted RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 OR7A17O14581 309 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 STX16O14662 325 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 PROM1O43490 865 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 PEX1O43933 1283 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 FGF17O60258 216 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 EEDO75530 441 aaKnown RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 PRKRAO75569 313 aaKnown RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 OR6B1O95007 311 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 ETHE1O95571 254 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 GBAP04062 536 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 SNRPAP09012 282 aaKnown RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 FAM58BPP0C7Q3 252 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 VSIG10L2P0DP72 767 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 COX7A2P14406 83 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 BSGP35613 385 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 DCTP40126 519 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 RFC3P40938 356 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 BUD31P41223 144 aaPredicted RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 ARFIP1P53367 373 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 HNRNPH2P55795 449 aaKnown RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 HSF1Q00613 529 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 FOLH1Q04609 750 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 BIKQ13323 160 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 CUL3Q13618 768 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 C3AR1Q16581 482 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 ZNF750Q32MQ0 723 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 TEX35Q5T0J7 233 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 SP5Q6BEB4 398 aaPredicted RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 TTC19Q6DKK2 380 aaPredicted RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 PGM2L1Q6PCE3 622 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 CYP20A1Q6UW02 462 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 RPS27LQ71UM5 84 aaKnown RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 MRGPRGQ86SM5 289 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 SIAH3Q8IW03 269 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 IFT20Q8IY31 132 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 GHDCQ8N2G8 530 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 ZCCHC7Q8N3Z6 543 aaKnown RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 C1orf162Q8NEQ5 155 aaPredicted RBP7.47□□□□□ -1.21
RIF1-211ENST00000494333 OR5L2Q8NGL0 311 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 WDR20Q8TBZ3 569 aa7.47□□□□□ -1.21
RIF1-211ENST00000494333 SLC2A12Q8TD20 617 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms