RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 MED27Q6P2C8 311 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 TNFAIP8L2Q6P589 184 aaPredicted RBP18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 PODNL1Q6PEZ8 512 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 TPRG1Q6ZUI0 275 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 LUZP2Q86TE4 346 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 APCDD1Q8J025 514 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 HORMAD2Q8N7B1 307 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 ZNF485Q8NCK3 441 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 OR6C4Q8NGE1 309 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 WDR48Q8TAF3 677 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 RFT1Q96AA3 541 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 TMEM19Q96HH6 336 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 KCNN2Q9H2S1 579 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 LIN7BQ9HAP6 207 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 NUDT15Q9NV35 164 aa18.25■□□□□ 0.51
SNAPC3-206ENST00000490969 FGBP02675 491 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 HLA-DPB1P04440 258 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 GAAP10253 952 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 MMP11P24347 488 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 MAPK8P45983 427 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 MTNR1AP48039 350 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 SMIM11AP58511 58 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 CDK5Q00535 292 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 COX10Q12887 443 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 TMEM240Q5SV17 173 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 RAET1GQ6H3X3 334 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 ADGRD2Q7Z7M1 963 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 FOXJ1Q92949 421 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 CHFRQ96EP1 664 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 THAP7Q9BT49 309 aaPredicted RBP18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 NLNQ9BYT8 704 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 CLEC4MQ9H2X3 399 aaPredicted RBP18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 CXorf36Q9H7Y0 433 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 MYNNQ9NPC7 610 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 MRPL17Q9NRX2 175 aaKnown RBP18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 ACAD8Q9UKU7 415 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 C2orf92A0A1B0GVN3 265 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 EPHX1P07099 455 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 TFPIP10646 304 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 CXCL3P19876 107 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 UQCRC2P22695 453 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 BTCP35070 178 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 PIN1Q13526 163 aaPredicted RBP18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 IER5LQ5T953 404 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 TPGS2Q68CL5 300 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 RETSATQ6NUM9 610 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 KIAA1211LQ6NV74 962 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 CD300LDQ6UXZ3 194 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 SLC36A4Q6YBV0 504 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 PRSS42Q7Z5A4 293 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 ZER1Q7Z7L7 766 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 LHFPL3Q86UP9 236 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 SLC9A6Q92581 669 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 UBQLN2Q9UHD9 624 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 INSL5Q9Y5Q6 135 aa18.24■□□□□ 0.51
SNAPC3-206ENST00000490969 TGM5O43548 720 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 RRASP10301 218 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 SERPINA4P29622 427 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 ERVFC1P60507 584 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 HTRA4P83105 476 aaPredicted RBP18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 HSF2Q03933 536 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 ARHGAP15Q53QZ3 475 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 CD276Q5ZPR3 534 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 TMEM91Q6ZNR0 172 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 TMPRSS11BQ86T26 416 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 HS6ST3Q8IZP7 471 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 ASZ1Q8WWH4 475 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 NEIL2Q969S2 332 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 ZNF354BQ96LW1 612 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 UBL7Q96S82 380 aaPredicted RBP18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 ZBP1Q9H171 429 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 A4GALTQ9NPC4 353 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 GPR52Q9Y2T5 361 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 CACNG2Q9Y698 323 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 CD8B2A6NJW9 211 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 TSPAN4O14817 238 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 KLHL18O94889 574 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 MPC2O95563 127 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 CD8BP10966 210 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 CELP19835 753 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 ZNF81P51508 661 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 SMSP52788 366 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 NDUFA9Q16795 377 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 UAP1L1Q3KQV9 507 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 LGALSLQ3ZCW2 172 aaPredicted RBP18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 MINDY4Q4G0A6 757 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 FAM180BQ6P0A1 224 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 B3GLCTQ6Y288 498 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 SMG7Q92540 1137 aaKnown RBP18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 SCRN2Q96FV2 425 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 OR51J1Q9H342 316 aa18.23■□□□□ 0.51
SNAPC3-206ENST00000490969 HIDE1A8MVS5 230 aa18.22■□□□□ 0.51
SNAPC3-206ENST00000490969 SLC16A8O95907 504 aa18.22■□□□□ 0.51
SNAPC3-206ENST00000490969 TGFB1P01137 390 aa18.22■□□□□ 0.51
SNAPC3-206ENST00000490969 MYOGP15173 224 aa18.22■□□□□ 0.51
SNAPC3-206ENST00000490969 GJA1P17302 382 aa18.22■□□□□ 0.51
SNAPC3-206ENST00000490969 SSTR2P30874 369 aa18.22■□□□□ 0.51
SNAPC3-206ENST00000490969 SLC1A3P43003 542 aa18.22■□□□□ 0.51
SNAPC3-206ENST00000490969 NTRK2Q16620 822 aa18.22■□□□□ 0.51
SNAPC3-206ENST00000490969 TXNDC8Q6A555 127 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms