RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 PARD6BQ9BYG5 372 aa18.1■□□□□ 0.49
SMC4-222ENST00000490207 FOLH1BQ9HBA9 442 aa18.1■□□□□ 0.49
SMC4-222ENST00000490207 SPRR3Q9UBC9 169 aa18.1■□□□□ 0.49
SMC4-222ENST00000490207 ACAD8Q9UKU7 415 aa18.1■□□□□ 0.49
SMC4-222ENST00000490207 GPR55Q9Y2T6 319 aaPredicted RBP18.1■□□□□ 0.49
SMC4-222ENST00000490207 FREM3P0C091 2139 aa18.1■□□□□ 0.49
SMC4-222ENST00000490207 CENPEQ02224 2701 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 TO15178 435 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 PLOD3O60568 738 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 COQ9O75208 318 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 ERN1O75460 977 aaKnown RBP18.09■□□□□ 0.49
SMC4-222ENST00000490207 JUNP05412 331 aaKnown RBP18.09■□□□□ 0.49
SMC4-222ENST00000490207 ACVR2AP27037 513 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 RPL38P63173 70 aaKnown RBP18.09■□□□□ 0.49
SMC4-222ENST00000490207 ZNF155Q12901 538 aaPredicted RBP18.09■□□□□ 0.49
SMC4-222ENST00000490207 KIAA0040Q15053 153 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 KRT71Q3SY84 523 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 WLSQ5T9L3 541 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 DESI1Q6ICB0 168 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 TMEM81Q6P7N7 255 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 ZCCHC23Q6ZST2 131 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 NUP54Q7Z3B4 507 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 CA5BP1Q8WTZ4 195 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 TWIST2Q8WVJ9 160 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 TMEM41AQ96HV5 264 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 VSTM2LQ96N03 204 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 NODALQ96S42 347 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 OSBPL11Q9BXB4 747 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 STMN4Q9H169 189 aaPredicted RBP18.09■□□□□ 0.49
SMC4-222ENST00000490207 TUBB1Q9H4B7 451 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 EML4Q9HC35 981 aaKnown RBP18.09■□□□□ 0.49
SMC4-222ENST00000490207 ACKR4Q9NPB9 350 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 KLRF1Q9NZS2 232 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 C15orf41Q9Y2V0 281 aa18.09■□□□□ 0.49
SMC4-222ENST00000490207 ARHGAP21Q5T5U3 1957 aa18.08■□□□□ 0.49
SMC4-222ENST00000490207 ESPNB1AK53 854 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 TMEM233B4DJY2 109 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 UGT2B11O75310 529 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 NME6O75414 186 aaPredicted RBP18.08■□□□□ 0.48
SMC4-222ENST00000490207 SLITRK5O94991 958 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 CREB1P16220 341 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 TACR1P25103 407 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 MC3RP41968 323 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 TRPC1P48995 793 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 CORO7P57737 925 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 NUP107P57740 925 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 ARL13AQ5H913 290 aaPredicted RBP18.08■□□□□ 0.48
SMC4-222ENST00000490207 FNDC7Q5VTL7 733 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 NPSR1Q6W5P4 371 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 ACAD11Q709F0 780 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 HOMEZQ8IX15 550 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 DDIASQ8IXT1 998 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 NEIL3Q8TAT5 605 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 ASB5Q8WWX0 329 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 RND1Q92730 232 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 TMBIM1Q969X1 311 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 EGLN2Q96KS0 407 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 FCRL1Q96LA6 429 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 CCT7Q99832 543 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 UBQLN3Q9H347 655 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 TAS2R9Q9NYW1 312 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 TAS2R7Q9NYW3 318 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 EXO1Q9UQ84 846 aaKnown RBP18.08■□□□□ 0.48
SMC4-222ENST00000490207 DNAJC15Q9Y5T4 150 aa18.08■□□□□ 0.48
SMC4-222ENST00000490207 PRAMEF25A6NGN4 478 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 C19orf84I3L1E1 186 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 GNB5O14775 395 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 WDR1O75083 606 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 TRAPPC6AO75865 159 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 LINC00032P0C843 101 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 CT45A8P0DMV1 189 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 CT45A9P0DMV2 189 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 COX6B1P14854 86 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 PSPHP78330 225 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 ZNF844Q08AG5 666 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 CT45A2Q5DJT8 189 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 SH2D4BQ5SQS7 431 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 SLC30A6Q6NXT4 461 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 TMEM107Q6UX40 140 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 ANGPTL8Q6UXH0 198 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 Q6ZSR9 355 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 AGR3Q8TD06 166 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 GFM2Q969S9 779 aaKnown RBP18.07■□□□□ 0.48
SMC4-222ENST00000490207 NTNG2Q96CW9 530 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 GLIPR2Q9H4G4 154 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 RUBCNLQ9H714 662 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 RNF6Q9Y252 685 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 TRAF6Q9Y4K3 522 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 FAM215AQ9Y5M1 114 aa18.07■□□□□ 0.48
SMC4-222ENST00000490207 A0A087WV62 115 aa18.06■□□□□ 0.48
SMC4-222ENST00000490207 C15orf38-AP3S2A0A0A6YYH1 394 aa18.06■□□□□ 0.48
SMC4-222ENST00000490207 OR6C70A6NIJ9 312 aa18.06■□□□□ 0.48
SMC4-222ENST00000490207 PIP5K1BO14986 540 aa18.06■□□□□ 0.48
SMC4-222ENST00000490207 LSM1O15116 133 aaKnown RBP18.06■□□□□ 0.48
SMC4-222ENST00000490207 PDPK1O15530 556 aa18.06■□□□□ 0.48
SMC4-222ENST00000490207 TYROBPO43914 113 aa18.06■□□□□ 0.48
SMC4-222ENST00000490207 REM1O75628 298 aa18.06■□□□□ 0.48
SMC4-222ENST00000490207 HPNP05981 417 aa18.06■□□□□ 0.48
SMC4-222ENST00000490207 SNRPB2P08579 225 aaKnown RBP18.06■□□□□ 0.48
SMC4-222ENST00000490207 FGF4P08620 206 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms