RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 PAQR7Q86WK9 346 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PRIMA1Q86XR5 153 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 LRRC43Q8N309 656 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SLCO2A1Q92959 643 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 BSCL2Q96G97 398 aaPredicted RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 TCEANC2Q96MN5 208 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 VSTM2LQ96N03 204 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PANX2Q96RD6 677 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 DDX47Q9H0S4 455 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 RIOX1Q9H6W3 641 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 CNGB3Q9NQW8 809 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PILRAQ9UKJ1 303 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 STK38LQ9Y2H1 464 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 COMMD3-BMI1R4GMX3 469 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 A0A087WWV3 80 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 A0A0A6YYD4 124 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SPRY3O43610 288 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PDE5AO76074 875 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 ZWINTO95229 277 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PGK1P00558 417 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 HOXB7P09629 217 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 BMP7P18075 431 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PTGFRP43088 359 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 FMO5P49326 533 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 HNRNPA3P51991 378 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 HERV-K104P63124 156 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 GUCY2DQ02846 1103 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 GFPT1Q06210 699 aaPredicted RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 BST1Q10588 318 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 NT5DC1Q5TFE4 455 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 TMEM65Q6PI78 240 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 RANBP3LQ86VV4 465 aaPredicted RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 AMIGO1Q86WK6 493 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 CHSY1Q86X52 802 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SYT14Q8NB59 555 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 AGR3Q8TD06 166 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 DNAJC9Q8WXX5 260 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 HSD17B8Q92506 261 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 THOC3Q96J01 351 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 CAPZA3Q96KX2 299 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 ATP6V1G3Q96LB4 118 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PRICKLE1Q96MT3 831 aaPredicted RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 OR14A2Q96R54 314 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 C19orf43Q9BQ61 176 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SYT15Q9BQS2 421 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 LAT2Q9GZY6 243 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 GAREM1Q9H706 876 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 EURLQ9NYK6 297 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 WRAP73Q9P2S5 460 aaPredicted RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 PILRBQ9UKJ0 227 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 MRPS33Q9Y291 106 aaKnown RBP2.63□□□□□ -1.99
UBXN4-208ENST00000490163 SBF1O95248 1867 aa2.63□□□□□ -1.99
UBXN4-208ENST00000490163 GREB1LQ9C091 1923 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 PCDH11XQ9BZA7 1347 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 KCNE1BA0A087WTH5 132 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 WASHC1A8K0Z3 465 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 KCNU1A8MYU2 1149 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 E7ENQ6 273 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 TMEM189-UBE2V1I3L0A0 370 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 GAPDHSO14556 408 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF197O14709 1029 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 SERPINE2P07093 398 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 HKR1P10072 659 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 ACADSP16219 412 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 PGCP20142 388 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 EPHA2P29317 976 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 MARCKSP29966 332 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 PRKAR2BP31323 418 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 CHI3L1P36222 383 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 AVPR1AP37288 418 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 TUFMP49411 452 aaKnown RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 CTSWP56202 376 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF155Q12901 538 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 UBE2V1Q13404 147 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 CYLC2Q14093 348 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 IL18Q14116 193 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF268Q14587 947 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 SYPL1Q16563 259 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 SLC9C1Q4G0N8 1177 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 CYBRD1Q53TN4 286 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 TTMPQ5BVD1 217 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 CMPK2Q5EBM0 449 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 C6orf163Q5TEZ5 329 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 C11orf63Q6NUN7 778 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 H3F3CQ6NXT2 135 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 WASH2PQ6VEQ5 465 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 ASCL4Q6XD76 172 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 CERS6Q6ZMG9 384 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 ZNF704Q6ZNC4 412 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 GTPBP8Q8N3Z3 284 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 GVQW1Q8N7I0 195 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 SLC35F5Q8WV83 523 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 DNAJA4Q8WW22 397 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 NUS1Q96E22 293 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 OXNAD1Q96HP4 312 aaPredicted RBP2.62□□□□□ -1.99
UBXN4-208ENST00000490163 TGM7Q96PF1 710 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 MAGT1Q9H0U3 335 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 TMEM231Q9H6L2 316 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 POLD4Q9HCU8 107 aa2.62□□□□□ -1.99
UBXN4-208ENST00000490163 FGF21Q9NSA1 209 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms