RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 TXNDC12O95881 172 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 TGM6O95932 706 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 AGTP01019 485 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 FHP07954 510 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 ENO3P13929 434 aaPredicted RBP2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF44P15621 663 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 CEBPBP17676 345 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 FCARP24071 287 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 DPP4P27487 766 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 NMT1P30419 496 aaKnown RBP2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 MNDAP41218 407 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 SYKP43405 635 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 KCNK10P57789 538 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 SSTP61278 116 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 BNC1Q01954 994 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 CACNG1Q06432 222 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 MYBPHQ13203 477 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 DMP1Q13316 513 aaPredicted RBP2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 RBBP7Q16576 425 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 CLPPQ16740 277 aaPredicted RBP2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 HKDC1Q2TB90 917 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 GGTA1PQ4G0N0 100 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 LIN9Q5TKA1 542 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 TTC27Q6P3X3 843 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 CD164L2Q6UWJ8 174 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 CEACAM20Q6UY09 585 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 C17orf107Q6ZR85 190 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 KIAA1328Q86T90 577 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 PALB2Q86YC2 1186 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 UBE2J2Q8N2K1 259 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF843Q8N446 348 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 CSGALNACT2Q8N6G5 542 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 FAM86B1Q8N7N1 296 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 FAM110BQ8TC76 370 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 SLC22A8Q8TCC7 542 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 CD99L2Q8TCZ2 262 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 ST8SIA1Q92185 356 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 SEPT8Q92599 483 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 RTP4Q96DX8 246 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 MTERF3Q96E29 417 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 INPP4AQ96PE3 977 aaPredicted RBP2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 TECTBQ96PL2 329 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 VPS35Q96QK1 796 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 NUSAP1Q9BXS6 441 aaKnown RBP2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 TDRD1Q9BXT4 1180 aaKnown RBP2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 AZI2Q9H6S1 392 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF665Q9H7R5 613 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 GKN1Q9NS71 199 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 ACOXLQ9NUZ1 547 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF701Q9NV72 531 aaPredicted RBP2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 TECRQ9NZ01 308 aaKnown RBP2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 PTTG3PQ9NZH4 202 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 IL36RNQ9UBH0 155 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 MEMO1Q9Y316 297 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 MRPL11Q9Y3B7 192 aaKnown RBP2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 RHBDD3Q9Y3P4 386 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 ABCC6O95255 1503 aa2.85□□□□□ -1.95
DEPDC1-204ENST00000489862 RTL1A6NKG5 1358 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 KIF24Q5T7B8 1368 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 LRRC37A3O60309 1634 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 OVOS2A0A0G2JMS6 1433 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 PARP4Q9UKK3 1724 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 SCN5AQ14524 2016 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 A0A1B0GVL5 298 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 PLSCR5A0PG75 271 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 LINC01553A4QN01 128 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 HNRNPCL2B2RXH8 293 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 M0R296 226 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 NDUFS8O00217 210 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 CETN3O15182 167 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 NBR2O15453 112 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 ITM2AO43736 263 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 EFNA2O43921 213 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 CIDEAO60543 219 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 KCNJ13O60928 360 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 MTRF1O75570 445 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 CGAP01215 116 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 GAPDHP04406 335 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 KRT19P08727 400 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 SLC2A3P11169 496 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 GCFC2P16383 781 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 SRMP19623 302 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 NT5EP21589 574 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 LAP3P28838 519 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 STARP49675 285 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 CCR4P51679 360 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 CTSCP53634 463 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 GEMP55040 296 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 SLC3A1Q07837 685 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 FGL1Q08830 312 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 TRAF2Q12933 501 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 TAF10Q12962 218 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 XRCC4Q13426 336 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 EXOSC2Q13868 293 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 SPHARQ15513 63 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 EXT1Q16394 746 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 HLFQ16534 295 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 MTHFSDQ2M296 383 aaKnown RBP2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 PDZK1Q5T2W1 519 aa2.84□□□□□ -1.95
DEPDC1-204ENST00000489862 CARD17Q5XLA6 110 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms