RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 SMPD3Q9NY59 655 aaPredicted RBP3.58□□□□□ -1.84
XRN1-213ENST00000489241 CACNG5Q9UF02 275 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 PURGQ9UJV8 347 aaKnown RBP3.58□□□□□ -1.84
XRN1-213ENST00000489241 IKBKGQ9Y6K9 419 aa3.58□□□□□ -1.84
XRN1-213ENST00000489241 LOC105371242A0A075B767 164 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 FBLL1A6NHQ2 334 aaKnown RBP3.57□□□□□ -1.84
XRN1-213ENST00000489241 ASB14A6NK59 587 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 LRRC30A6NM36 301 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 WASHC1A8K0Z3 465 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 NPIPA2E9PIF3 369 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 CYB561D2O14569 222 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 EI24O14681 340 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 ARHGEF9O43307 516 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 RANBP6O60518 1105 aaKnown RBP3.57□□□□□ -1.84
XRN1-213ENST00000489241 UFL1O94874 794 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 DUS4LO95620 317 aaKnown RBP3.57□□□□□ -1.84
XRN1-213ENST00000489241 CCDC159P0C7I6 412 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 ZSCAN5DPP0CG00 497 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 GSTT2P0CG29 244 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 GSTT2BP0CG30 244 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 RPA2P15927 270 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 CA8P35219 290 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 UBE2HP62256 183 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 IL24Q13007 206 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 TMEM187Q14656 261 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 EMC2Q15006 297 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 MTHFSDQ2M296 383 aaKnown RBP3.57□□□□□ -1.84
XRN1-213ENST00000489241 CCDC57Q2TAC2 916 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 CCDC152Q4G0S7 254 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 LINC01620Q4KN68 170 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 SPATA46Q5T0L3 261 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 CENPPQ6IPU0 288 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 ATRAIDQ6UW56 229 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 CENPUQ71F23 418 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 Q7L0L9 218 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 NET1Q7Z628 596 aaPredicted RBP3.57□□□□□ -1.84
XRN1-213ENST00000489241 LUZP1Q86V48 1076 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 CARM1Q86X55 608 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 STEAP2Q8NFT2 490 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 OR2T6Q8NHC8 308 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 SPPL2AQ8TCT8 520 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 SHC3Q92529 594 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 ADIPOR1Q96A54 375 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 NABP1Q96AH0 204 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 LPAR2Q9HBW0 351 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 THYN1Q9P016 225 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 EIF3KQ9UBQ5 218 aaKnown RBP3.57□□□□□ -1.84
XRN1-213ENST00000489241 GHRLQ9UBU3 117 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 EMCNQ9ULC0 261 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.57□□□□□ -1.84
XRN1-213ENST00000489241 EXOGQ9Y2C4 368 aaKnown RBP3.57□□□□□ -1.84
XRN1-213ENST00000489241 MRPS7Q9Y2R9 242 aaKnown RBP3.57□□□□□ -1.84
XRN1-213ENST00000489241 MAB21L2Q9Y586 359 aa3.57□□□□□ -1.84
XRN1-213ENST00000489241 CCDC7Q96M83 1385 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 A0A0J9YVX5 310 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 IGLON5A6NGN9 336 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 A8MUI8 341 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 K7EQG2 157 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 K7EQM0 130 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 TRAFD1O14545 582 aaPredicted RBP3.56□□□□□ -1.84
XRN1-213ENST00000489241 JAK2O60674 1132 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 SDC3O75056 442 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 MTX2O75431 263 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 FRAT2O75474 233 aaPredicted RBP3.56□□□□□ -1.84
XRN1-213ENST00000489241 IGSF6O95976 241 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 OPN1MWP04001 364 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 CSF2P04141 144 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 OPN1MW2P0DN77 364 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 OPN1MW3P0DN78 364 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 FOSL2P15408 326 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 PTGER3P43115 390 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 HAND2P61296 217 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 NOP14P78316 857 aaKnown RBP3.56□□□□□ -1.84
XRN1-213ENST00000489241 HMGN5P82970 282 aaKnown RBP3.56□□□□□ -1.84
XRN1-213ENST00000489241 TFDP1Q14186 410 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 FASTKQ14296 549 aaKnown RBP3.56□□□□□ -1.84
XRN1-213ENST00000489241 ZNF841Q6ZN19 808 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 CCDC71Q8IV32 467 aaPredicted RBP3.56□□□□□ -1.84
XRN1-213ENST00000489241 ZNF781Q8N8C0 355 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 LHX4Q969G2 390 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 LINC00479Q96M42 142 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 ZNF607Q96SK3 696 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 ALG12Q9BV10 488 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 GPR174Q9BXC1 333 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 PARLQ9H300 379 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 MEAF6Q9HAF1 191 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 DEPPQ9NTK1 212 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 C1orf123Q9NWV4 160 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 BARHL2Q9NY43 387 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 TAS2R16Q9NYV7 291 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 THAP10Q9P2Z0 257 aaPredicted RBP3.56□□□□□ -1.84
XRN1-213ENST00000489241 SLC9A8Q9Y2E8 581 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 AP4B1Q9Y6B7 739 aa3.56□□□□□ -1.84
XRN1-213ENST00000489241 CARMIL1Q5VZK9 1371 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 WDR81Q562E7 1941 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 NPIPA5A0A0B4J1W7 369 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 LRIT2A6NDA9 550 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 ARHGEF33A8MVX0 844 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 NPIPA5E9PKD4 350 aa3.55□□□□□ -1.84
XRN1-213ENST00000489241 K7ERI5 159 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms