RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 CDRT4Q8N9R6 151 aa11.5□□□□□ -0.57
COL4A5-206ENST00000489230 GOLM1Q8NBJ4 401 aa11.5□□□□□ -0.57
COL4A5-206ENST00000489230 FAM98AQ8NCA5 519 aaKnown RBP11.5□□□□□ -0.57
COL4A5-206ENST00000489230 CATSPER1Q8NEC5 780 aa11.5□□□□□ -0.57
COL4A5-206ENST00000489230 NUP43Q8NFH3 380 aa11.5□□□□□ -0.57
COL4A5-206ENST00000489230 OR56A1Q8NGH5 318 aa11.5□□□□□ -0.57
COL4A5-206ENST00000489230 RFWD2Q8NHY2 731 aa11.5□□□□□ -0.57
COL4A5-206ENST00000489230 SFXN5Q8TD22 340 aa11.5□□□□□ -0.57
COL4A5-206ENST00000489230 MAGED4Q96JG8 741 aa11.5□□□□□ -0.57
COL4A5-206ENST00000489230 BTBD9Q96Q07 612 aa11.5□□□□□ -0.57
COL4A5-206ENST00000489230 SECISBP2Q96T21 854 aaKnown RBP11.5□□□□□ -0.57
COL4A5-206ENST00000489230 NSRP1Q9H0G5 558 aaKnown RBP11.5□□□□□ -0.57
COL4A5-206ENST00000489230 LIN28AQ9H9Z2 209 aaKnown RBP11.5□□□□□ -0.57
COL4A5-206ENST00000489230 CNIH4Q9P003 139 aa11.5□□□□□ -0.57
COL4A5-206ENST00000489230 SNX8Q9Y5X2 465 aa11.5□□□□□ -0.57
COL4A5-206ENST00000489230 NPFFR2Q9Y5X5 522 aa11.5□□□□□ -0.57
COL4A5-206ENST00000489230 NBPF19A0A087WUL8 3843 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 DUXAA6NLW8 204 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 TTLL8A6PVC2 850 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 MAN1A2O60476 641 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 ERN1O75460 977 aaKnown RBP11.49□□□□□ -0.57
COL4A5-206ENST00000489230 C6orf47O95873 294 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 FBXO45P0C2W1 286 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 UQCRC2P22695 453 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 SOX18P35713 384 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 SOX3P41225 446 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 PRKAG1P54619 331 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 PSMD4P55036 377 aaKnown RBP11.49□□□□□ -0.57
COL4A5-206ENST00000489230 KCNK10P57789 538 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 TXNL4AP83876 142 aaKnown RBP11.49□□□□□ -0.57
COL4A5-206ENST00000489230 IGFBP7Q16270 282 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 MAPKAPK3Q16644 382 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 ZNF791Q3KP31 576 aaPredicted RBP11.49□□□□□ -0.57
COL4A5-206ENST00000489230 NADK2Q4G0N4 442 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 SPANXN4Q5MJ08 99 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 SLC22A10Q63ZE4 541 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 NUP54Q7Z3B4 507 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 CPLX4Q7Z7G2 160 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 AMER2Q8N7J2 671 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 MDS2Q8NDY4 140 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 DNAJB8Q8NHS0 232 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 GOT1L1Q8NHS2 421 aaPredicted RBP11.49□□□□□ -0.57
COL4A5-206ENST00000489230 SPACA9Q96E40 222 aaPredicted RBP11.49□□□□□ -0.57
COL4A5-206ENST00000489230 THOC1Q96FV9 657 aaKnown RBP11.49□□□□□ -0.57
COL4A5-206ENST00000489230 VSTM2LQ96N03 204 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 CCDC115Q96NT0 180 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 FOLH1BQ9HBA9 442 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 Q9N2J8 555 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 AGPAT4Q9NRZ5 378 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 ZCCHC3Q9NUD5 404 aaKnown RBP11.49□□□□□ -0.57
COL4A5-206ENST00000489230 GIN1Q9NXP7 522 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 ANKRD10Q9NXR5 420 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 FAF1Q9UNN5 650 aaPredicted RBP11.49□□□□□ -0.57
COL4A5-206ENST00000489230 KLF13Q9Y2Y9 288 aaPredicted RBP11.49□□□□□ -0.57
COL4A5-206ENST00000489230 OR10H1Q9Y4A9 318 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 DOCK10Q96BY6 2186 aa11.49□□□□□ -0.57
COL4A5-206ENST00000489230 RELNP78509 3460 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 SCN2BO60939 215 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 SLC25A12O75746 678 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 NEURL1O76050 574 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 OR6B1O95007 311 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 RASAL1O95294 804 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 PSMG1O95456 288 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 CPSF4O95639 269 aaKnown RBP11.48□□□□□ -0.57
COL4A5-206ENST00000489230 AGR2O95994 175 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 CRYABP02511 175 aaKnown RBP11.48□□□□□ -0.57
COL4A5-206ENST00000489230 P04436 131 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 ABCB1P08183 1280 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-206ENST00000489230 CNR1P21554 472 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 ADSLP30566 484 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-206ENST00000489230 LSP1P33241 339 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 PTGER1P34995 402 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 MAGEA8P43361 318 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 TRPC1P48995 793 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 CDK9P50750 372 aaKnown RBP11.48□□□□□ -0.57
COL4A5-206ENST00000489230 ANXA11P50995 505 aaKnown RBP11.48□□□□□ -0.57
COL4A5-206ENST00000489230 WNT3P56703 355 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 HBA1P69905 142 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 FOXK1P85037 733 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 DUSP8Q13202 625 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 EFR3AQ14156 821 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 DECR1Q16698 335 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 TBCELQ5QJ74 424 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 ZNF468Q5VIY5 522 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-206ENST00000489230 PAOXQ6QHF9 649 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 C16orf47Q6ZP98 133 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-206ENST00000489230 SLC44A2Q8IWA5 706 aaPredicted RBP11.48□□□□□ -0.57
COL4A5-206ENST00000489230 SLC34A3Q8N130 599 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 CPSF7Q8N684 471 aaKnown RBP11.48□□□□□ -0.57
COL4A5-206ENST00000489230 POGLUT1Q8NBL1 392 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 OR4A15Q8NGL6 344 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 TSPEARQ8WU66 669 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 TMCO6Q96DC7 493 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 FAM120BQ96EK7 910 aaKnown RBP11.48□□□□□ -0.57
COL4A5-206ENST00000489230 SCMH1Q96GD3 660 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 ITCHQ96J02 903 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 TEX37Q96LM6 180 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 MS4A4EQ96PG1 132 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 PANX1Q96RD7 426 aa11.48□□□□□ -0.57
COL4A5-206ENST00000489230 LMF2Q9BU23 707 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms