RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 MPIP34949 423 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 TRPC1P48995 793 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 RPP38P78345 283 aaKnown RBP22.88■■□□□ 1.25
HMGN1-217ENST00000489072 ZNF585AQ6P3V2 769 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 EGLN2Q96KS0 407 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 VSTM2LQ96N03 204 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 BTBD9Q96Q07 612 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 TMEM109Q9BVC6 243 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 EXO5Q9H790 373 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 LRTM1Q9HBL6 345 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 C1orf109Q9NX04 203 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 TAS2R7Q9NYW3 318 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 B4GALT7Q9UBV7 327 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 ACAD8Q9UKU7 415 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 FAM215AQ9Y5M1 114 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 DNAJC15Q9Y5T4 150 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 MED12Q93074 2177 aa22.88■■□□□ 1.25
HMGN1-217ENST00000489072 CREBBPQ92793 2442 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 TMEM233B4DJY2 109 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 SLC28A1O00337 649 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 NPHS1O60500 1241 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 PLOD3O60568 738 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 UGT2B11O75310 529 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 JUNP05412 331 aaKnown RBP22.87■■□□□ 1.25
HMGN1-217ENST00000489072 CT45A8P0DMV1 189 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 CT45A9P0DMV2 189 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 ACVR2AP27037 513 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 GDF1P27539 372 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 CORO7P57737 925 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 NUP107P57740 925 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 CT45A2Q5DJT8 189 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 RTL6Q6ICC9 239 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 NPSR1Q6W5P4 371 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 RNF165Q6ZSG1 346 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 ZCCHC23Q6ZST2 131 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 NUP54Q7Z3B4 507 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 SARAFQ96BY9 339 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 METTL2AQ96IZ6 378 aaKnown RBP22.87■■□□□ 1.25
HMGN1-217ENST00000489072 FCRL1Q96LA6 429 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 GNRHR2Q96P88 292 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 UBQLN3Q9H347 655 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 FOLH1BQ9HBA9 442 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 MIEF1Q9NQG6 463 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 COQ3Q9NZJ6 369 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 RNF6Q9Y252 685 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 WBP11Q9Y2W2 641 aaKnown RBP22.87■■□□□ 1.25
HMGN1-217ENST00000489072 ARHGAP21Q5T5U3 1957 aa22.87■■□□□ 1.25
HMGN1-217ENST00000489072 RGS14O43566 566 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 LINC00032P0C843 101 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 ARRB2P32121 409 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 PTGDSP41222 190 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 MASP1P48740 699 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 NCBP2P52298 156 aaKnown RBP eCLIP22.86■■□□□ 1.25
HMGN1-217ENST00000489072 PMPCAQ10713 525 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 UGT3A2Q3SY77 523 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 ARL13AQ5H913 290 aaPredicted RBP22.86■■□□□ 1.25
HMGN1-217ENST00000489072 TMEM81Q6P7N7 255 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 IKBIPQ70UQ0 350 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 PACS2Q86VP3 889 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 NEIL3Q8TAT5 605 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 TMBIM1Q969X1 311 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 TMEM41AQ96HV5 264 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 GLIPR2Q9H4G4 154 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 METTL7AQ9H8H3 244 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 SENP1Q9P0U3 644 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 C15orf41Q9Y2V0 281 aa22.86■■□□□ 1.25
HMGN1-217ENST00000489072 INTS1Q8N201 2190 aaKnown RBP22.86■■□□□ 1.25
HMGN1-217ENST00000489072 TACC2O95359 2948 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 MYO9AB2RTY4 2548 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 FIGNL2A6NMB9 653 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 GNB5O14775 395 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 TYROBPO43914 113 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 ERN1O75460 977 aaKnown RBP22.85■■□□□ 1.25
HMGN1-217ENST00000489072 SNRPB2P08579 225 aaKnown RBP22.85■■□□□ 1.25
HMGN1-217ENST00000489072 FGF4P08620 206 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 MC3RP41968 323 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 KIR3DL1P43629 444 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 CCDC71Q8IV32 467 aaPredicted RBP22.85■■□□□ 1.25
HMGN1-217ENST00000489072 CA5BP1Q8WTZ4 195 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 RND1Q92730 232 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 GALNT9Q9HCQ5 603 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 TRAF6Q9Y4K3 522 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 HCFC1P51610 2035 aa22.85■■□□□ 1.25
HMGN1-217ENST00000489072 C2orf72A6NCS6 295 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 ICOSLGO75144 302 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 NEFHP12036 1026 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 CDK9P50750 372 aaKnown RBP22.84■■□□□ 1.25
HMGN1-217ENST00000489072 ZNF844Q08AG5 666 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 WLSQ5T9L3 541 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 TIGD3Q6B0B8 471 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 TMEM107Q6UX40 140 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 MCEMP1Q8IX19 187 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 TWIST2Q8WVJ9 160 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 GFM2Q969S9 779 aaKnown RBP22.84■■□□□ 1.25
HMGN1-217ENST00000489072 AMDHD1Q96NU7 426 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 COL21A1Q96P44 957 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 TTYH2Q9BSA4 534 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 OSBPL11Q9BXB4 747 aa22.84■■□□□ 1.25
HMGN1-217ENST00000489072 STMN4Q9H169 189 aaPredicted RBP22.84■■□□□ 1.25
HMGN1-217ENST00000489072 A0A087WV62 115 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms