RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 LOC102723532A0A0G2JNH3 316 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 A0A1B0GX78 115 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 ANKDD1BA6NHY2 528 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 A8MT66 165 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 C21orf140B9A014 251 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 DSCR3O14972 297 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 TM9SF1O15321 606 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 NDUFS4O43181 175 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 HCRTR1O43613 425 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 SUPT7LO94864 414 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 SERPINB3P29508 390 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 SERPINB1P30740 379 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 DLSTP36957 453 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 HNF4AP41235 474 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 RPS15P62841 145 aaKnown RBP7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 DCDP81605 110 aaKnown RBP7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 CHIT1Q13231 466 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 TBCCQ15814 346 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 RBBP7Q16576 425 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 ZIK1Q3SY52 487 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 CFAP157Q5JU67 520 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 GKAP1Q5VSY0 366 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 LIPJQ5W064 366 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 PLAG1Q6DJT9 500 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 RHBDD2Q6NTF9 364 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 NIPAL1Q6NVV3 410 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 MED27Q6P2C8 311 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 PRMT9Q6P2P2 845 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 MZT2AQ6P582 158 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 TMIGD1Q6UXZ0 262 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 ZYG11AQ6WRX3 759 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 SH2D5Q6ZV89 423 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 GOLGA7Q7Z5G4 137 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 DSELQ8IZU8 1212 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 OR4N4Q8N0Y3 316 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 VPS37AQ8NEZ2 397 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 C9orf43Q8TAL5 461 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 SLC13A3Q8WWT9 602 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 CCT6BQ92526 530 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 ZNF285Q96NJ3 590 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 OR2A5Q96R48 311 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 NT5DC2Q9H857 520 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 LHX9Q9NQ69 397 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 ZNF71Q9NQZ8 489 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 IFT80Q9P2H3 777 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 TAGLN3Q9UI15 199 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 SH2B3Q9UQQ2 575 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 STK38LQ9Y2H1 464 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 PADI2Q9Y2J8 665 aa7.56□□□□□ -1.2
TRAPPC12-221ENST00000489032 CLCA1A8K7I4 914 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 FOXO6A8MYZ6 492 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 LCMT2O60294 686 aaKnown RBP7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 PLIN3O60664 434 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 UGDHO60701 494 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 SPAG7O75391 227 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 SIX3O95343 332 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 CLDN9O95484 217 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 MLYCDO95822 493 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 OTCP00480 354 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 VIMP08670 466 aaKnown RBP7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 RPS17P08708 135 aaKnown RBP7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 PCNAP12004 261 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 CPA3P15088 417 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 TCN2P20062 427 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 IMPDH1P20839 514 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 ZNF10P21506 573 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 CASP2P42575 452 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 SEC24CP53992 1094 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 PRKAA2P54646 552 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 STXBP1P61764 594 aaKnown RBP7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 HERVK_113P63132 956 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 MC1RQ01726 317 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 TGM3Q08188 693 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 DNASE1L3Q13609 305 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 CCNIQ14094 377 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 FAM53BQ14153 422 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 DOC2AQ14183 400 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 HKDC1Q2TB90 917 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 PRTGQ2VWP7 1150 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 NKAIN1Q4KMZ8 207 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 LCE4AQ5TA78 99 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 DEPDC1Q5TB30 811 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 PRAMEF17Q5VTA0 474 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 HHATQ5VTY9 493 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 C1orf189Q5VU69 101 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 MLIPQ5VWP3 458 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 GRHL2Q6ISB3 625 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 VWA1Q6PCB0 445 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 ABHD13Q7L211 337 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 TIPARPQ7Z3E1 657 aaKnown RBP7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 BANPQ8N9N5 519 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 MGARPQ8TDB4 240 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 ZNF473Q8WTR7 871 aaKnown RBP7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 CKAP2Q8WWK9 683 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 WDR34Q96EX3 536 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 MAGEB18Q96M61 343 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 CENPKQ9BS16 269 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 ALG8Q9BVK2 526 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 ERVK-6Q9BXR3 956 aa7.55□□□□□ -1.2
TRAPPC12-221ENST00000489032 SPRY4Q9C004 299 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms