RNA–Protein interactions for RNA: ENST00000488535.2

ABCA2-219, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 3,327 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-219ENST00000488535 FNDC11Q9BVV2 318 aa12.4□□□□□ -0.42
ABCA2-219ENST00000488535 FXYD6Q9H0Q3 95 aa12.4□□□□□ -0.42
ABCA2-219ENST00000488535 PRDM9Q9NQV7 894 aa12.4□□□□□ -0.42
ABCA2-219ENST00000488535 TAS2R7Q9NYW3 318 aa12.4□□□□□ -0.42
ABCA2-219ENST00000488535 CFAP97Q9P2B7 532 aa12.4□□□□□ -0.42
ABCA2-219ENST00000488535 ZNF69Q9UC07 566 aa12.4□□□□□ -0.42
ABCA2-219ENST00000488535 ENOPH1Q9UHY7 261 aa12.4□□□□□ -0.42
ABCA2-219ENST00000488535 PCDHGB7Q9Y5F8 929 aa12.4□□□□□ -0.42
ABCA2-219ENST00000488535 SPEGQ15772 3267 aa12.4□□□□□ -0.43
ABCA2-219ENST00000488535 ZC3H12DA2A288 527 aaKnown RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 H3BSH0 61 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 SLC28A2O43868 658 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 TCRBP04435 133 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 SELENOPP49908 381 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 BLVRAP53004 296 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 LGALS3BPQ08380 585 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 PLK5Q496M5 336 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 SLC30A6Q6NXT4 461 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 CREB3L1Q96BA8 519 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 FOPNLQ96NB1 174 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 SAMD11Q96NU1 681 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 ZNF282Q9UDV7 671 aaPredicted RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 PFDN2Q9UHV9 154 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 CPSF4LA6NMK7 179 aaKnown RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 HOXA2O43364 376 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 MRPL3P09001 348 aaKnown RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 CD22P20273 847 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 ACVR1BP36896 505 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 XCR1P46094 333 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 SLC11A2P49281 568 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 DSTNP60981 165 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 ELAVL2Q12926 359 aaKnown RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 HYAL4Q2M3T9 481 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 LRFN4Q6PJG9 635 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 SLC7A13Q8TCU3 470 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 ZFPM2Q8WW38 1151 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 PAWRQ96IZ0 340 aaKnown RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 GPR137Q96N19 417 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 GSDMCQ9BYG8 508 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 ZNF768Q9H5H4 540 aaKnown RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 RETREG1Q9H6L5 497 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 BRD9Q9H8M2 597 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 PCDHB16Q9NRJ7 776 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 CYB5R1Q9UHQ9 305 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 MGAT4BQ9UQ53 548 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 WASH4PA8MWX3 477 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 RTCAO00442 366 aaKnown RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 SPDEFO95238 335 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 RRASP10301 218 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 SHC1P29353 583 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 HMGCLP35914 325 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 MTNR1AP48039 350 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 GBX2P52951 348 aaPredicted RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 LIMK1P53667 647 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 MELKQ14680 651 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 ST3GAL2Q16842 350 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 COL28A1Q2UY09 1125 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 TMEM88Q6PEY1 159 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 ATRAIDQ6UW56 229 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 SIAH3Q8IW03 269 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 SERPINA12Q8IW75 414 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 ZNF683Q8IZ20 524 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 PGBD3Q8N328 593 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 DUSP18Q8NEJ0 188 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 TMEM163Q8TC26 289 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 SPRYD4Q8WW59 207 aaPredicted RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 TBC1D20Q96BZ9 403 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 ZSWIM3Q96MP5 696 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 ZNF582Q96NG8 517 aaPredicted RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 ZNF416Q9BWM5 594 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 H2AFY2Q9P0M6 372 aaPredicted RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 PCDHGA9Q9Y5G4 932 aaKnown RBP12.39□□□□□ -0.43
ABCA2-219ENST00000488535 CSNK1G3Q9Y6M4 447 aa12.39□□□□□ -0.43
ABCA2-219ENST00000488535 A0A1W2PRB8 838 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 hCG_1807616A0A1W2PRN6 198 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 UCHL1P09936 223 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 CSKP41240 450 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 CDH11P55287 796 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 UBE2MP61081 183 aaKnown RBP12.38□□□□□ -0.43
ABCA2-219ENST00000488535 ERVK-25P63136 954 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 PUM1Q14671 1186 aaKnown RBP eCLIP12.38□□□□□ -0.43
ABCA2-219ENST00000488535 GPRC6AQ5T6X5 926 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 CERS6Q6ZMG9 384 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 SLC39A5Q6ZMH5 540 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 LILRA3Q8N6C8 439 aaPredicted RBP12.38□□□□□ -0.43
ABCA2-219ENST00000488535 ZNF784Q8NCA9 323 aaPredicted RBP12.38□□□□□ -0.43
ABCA2-219ENST00000488535 WRAP53Q9BUR4 548 aaKnown RBP12.38□□□□□ -0.43
ABCA2-219ENST00000488535 QRSL1Q9H0R6 528 aaKnown RBP12.38□□□□□ -0.43
ABCA2-219ENST00000488535 LIN7BQ9HAP6 207 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 COPZ2Q9P299 210 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 MLXQ9UH92 298 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 TRIOO75962 3097 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 OR6C74A6NCV1 312 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 ARHGEF33A8MVX0 844 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 PDCD5O14737 125 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
ABCA2-219ENST00000488535 VNN2O95498 520 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 HPXP02790 462 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 H2AFB2P0C5Z0 115 aa12.38□□□□□ -0.43
ABCA2-219ENST00000488535 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms