RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 NPHS1O60500 1241 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 PLOD3O60568 738 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 UGT2B11O75310 529 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 CHRNGP07510 517 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 FGF4P08620 206 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 CT45A8P0DMV1 189 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 CT45A9P0DMV2 189 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 PRF1P14222 555 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 COX6B1P14854 86 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 TACR1P25103 407 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 GDF1P27539 372 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 MASP1P48740 699 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 TRPC1P48995 793 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 NUP107P57740 925 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 CT45A2Q5DJT8 189 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 WLSQ5T9L3 541 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 KANK2Q63ZY3 851 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 TIGD3Q6B0B8 471 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 RTL6Q6ICC9 239 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 TMEM81Q6P7N7 255 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 RNF165Q6ZSG1 346 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 ACAD11Q709F0 780 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 IKBIPQ70UQ0 350 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 MCEMP1Q8IX19 187 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 OR2T11Q8NH01 316 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 NEIL3Q8TAT5 605 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 ASB5Q8WWX0 329 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 RND1Q92730 232 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 TMBIM1Q969X1 311 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 TMEM41AQ96HV5 264 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 EGLN2Q96KS0 407 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 VSTM2LQ96N03 204 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 GNRHR2Q96P88 292 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 BTBD9Q96Q07 612 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 TMEM109Q9BVC6 243 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 PARD6BQ9BYG5 372 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 UBQLN3Q9H347 655 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 RUBCNLQ9H714 662 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 METTL7AQ9H8H3 244 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 FOLH1BQ9HBA9 442 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 LRTM1Q9HBL6 345 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 C1orf109Q9NX04 203 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 ALKBH4Q9NXW9 302 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 SENP1Q9P0U3 644 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 RNF6Q9Y252 685 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 TRAF6Q9Y4K3 522 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 FAM215AQ9Y5M1 114 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 DNAJC15Q9Y5T4 150 aa10.48□□□□□ -0.73
SPEN-205ENST00000487496 A0A087WV62 115 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 OR6C70A6NIJ9 312 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 TMEM233B4DJY2 109 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 TYROBPO43914 113 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 WDR1O75083 606 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 ICOSLGO75144 302 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 ERN1O75460 977 aaKnown RBP10.47□□□□□ -0.73
SPEN-205ENST00000487496 REM1O75628 298 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 TRAPPC6AO75865 159 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 JUNP05412 331 aaKnown RBP10.47□□□□□ -0.73
SPEN-205ENST00000487496 HPNP05981 417 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 SNRPB2P08579 225 aaKnown RBP10.47□□□□□ -0.73
SPEN-205ENST00000487496 LINC00032P0C843 101 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 GLI4P10075 376 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 NEFHP12036 1026 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 PTPN6P29350 595 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 CHRNB4P30926 498 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 PTGDSP41222 190 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 MC3RP41968 323 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 KIR3DL1P43629 444 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 CDK9P50750 372 aaKnown RBP10.47□□□□□ -0.73
SPEN-205ENST00000487496 NCBP2P52298 156 aaKnown RBP eCLIP10.47□□□□□ -0.73
SPEN-205ENST00000487496 CORO7P57737 925 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 UGT3A2Q3SY77 523 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 RFTN2Q52LD8 501 aaPredicted RBP10.47□□□□□ -0.73
SPEN-205ENST00000487496 ARL13AQ5H913 290 aaPredicted RBP10.47□□□□□ -0.73
SPEN-205ENST00000487496 SLC30A6Q6NXT4 461 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 NPSR1Q6W5P4 371 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 B3GNT6Q6ZMB0 384 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 CCDC71Q8IV32 467 aaPredicted RBP10.47□□□□□ -0.73
SPEN-205ENST00000487496 CLYBLQ8N0X4 340 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 LIX1Q8N485 282 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 MREGQ8N565 214 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 LILRB4Q8NHJ6 448 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 SLC35A4Q96G79 324 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 FCRL1Q96LA6 429 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 TTYH2Q9BSA4 534 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 STMN4Q9H169 189 aaPredicted RBP10.47□□□□□ -0.73
SPEN-205ENST00000487496 GLIPR2Q9H4G4 154 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 EML4Q9HC35 981 aaKnown RBP10.47□□□□□ -0.73
SPEN-205ENST00000487496 TAS2R9Q9NYW1 312 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 C15orf41Q9Y2V0 281 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 ITPR2Q14571 2701 aa10.47□□□□□ -0.73
SPEN-205ENST00000487496 C15orf38-AP3S2A0A0A6YYH1 394 aa10.46□□□□□ -0.73
SPEN-205ENST00000487496 C2orf72A6NCS6 295 aa10.46□□□□□ -0.73
SPEN-205ENST00000487496 PLOD2O00469 737 aa10.46□□□□□ -0.73
SPEN-205ENST00000487496 GNB5O14775 395 aa10.46□□□□□ -0.73
SPEN-205ENST00000487496 SNPHO15079 494 aa10.46□□□□□ -0.73
SPEN-205ENST00000487496 LSM1O15116 133 aaKnown RBP10.46□□□□□ -0.73
SPEN-205ENST00000487496 TSPAN2O60636 221 aa10.46□□□□□ -0.73
SPEN-205ENST00000487496 COQ9O75208 318 aa10.46□□□□□ -0.73
SPEN-205ENST00000487496 SLITRK5O94991 958 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms