RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 OMA1Q96E52 524 aa9.42□□□□□ -0.9
RNF220-215ENST00000487332 AMDHD1Q96NU7 426 aa9.42□□□□□ -0.9
RNF220-215ENST00000487332 UBQLN3Q9H347 655 aa9.42□□□□□ -0.9
RNF220-215ENST00000487332 GLIPR2Q9H4G4 154 aa9.42□□□□□ -0.9
RNF220-215ENST00000487332 FOLH1BQ9HBA9 442 aa9.42□□□□□ -0.9
RNF220-215ENST00000487332 NTMQ9P121 344 aa9.42□□□□□ -0.9
RNF220-215ENST00000487332 ZDHHC2Q9UIJ5 367 aa9.42□□□□□ -0.9
RNF220-215ENST00000487332 C19orf53Q9UNZ5 99 aaPredicted RBP9.42□□□□□ -0.9
RNF220-215ENST00000487332 PTGDR2Q9Y5Y4 395 aa9.42□□□□□ -0.9
RNF220-215ENST00000487332 FIGNL2A6NMB9 653 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 FAM166BA8MTA8 275 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 TMEM233B4DJY2 109 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 ADAM10O14672 748 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 CDC40O60508 579 aaKnown RBP eCLIP9.41□□□□□ -0.9
RNF220-215ENST00000487332 TSPAN2O60636 221 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 WDR1O75083 606 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 HPNP05981 417 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 HOXD4P09016 255 aaPredicted RBP9.41□□□□□ -0.9
RNF220-215ENST00000487332 LINC00032P0C843 101 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 ESRRAP11474 423 aaPredicted RBP9.41□□□□□ -0.9
RNF220-215ENST00000487332 PRPS2P11908 318 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 BCKDHAP12694 445 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 PTGER4P35408 488 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 HPCAL1P37235 193 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 MC3RP41968 323 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 PNLIPRP2P54317 469 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 PSG6Q00889 435 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 SLC10A1Q14973 349 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 PRSS53Q2L4Q9 553 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 CYP27C1Q4G0S4 372 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 NHSL2Q5HYW2 709 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 BEND6Q5SZJ8 279 aaPredicted RBP9.41□□□□□ -0.9
RNF220-215ENST00000487332 PRAMEF20Q5VT98 475 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 TMEM211Q6ICI0 200 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 FAM180BQ6P0A1 224 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 NPSR1Q6W5P4 371 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 CAMKMTQ7Z624 323 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 PACS2Q86VP3 889 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 DDIASQ8IXT1 998 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 SIMC1Q8NDZ2 872 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 CDC26Q8NHZ8 85 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 RAB3IL1Q8TBN0 382 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 SARAFQ96BY9 339 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 PPCDCQ96CD2 204 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 TMCO6Q96DC7 493 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 ELP4Q96EB1 424 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 ZBED6CLQ96FA7 236 aaPredicted RBP9.41□□□□□ -0.9
RNF220-215ENST00000487332 EGLN2Q96KS0 407 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 RILPQ96NA2 401 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 COL21A1Q96P44 957 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 PHF12Q96QT6 1004 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 LMF2Q9BU23 707 aaKnown RBP9.41□□□□□ -0.9
RNF220-215ENST00000487332 OSBPL11Q9BXB4 747 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 DDX18Q9NVP1 670 aaKnown RBP9.41□□□□□ -0.9
RNF220-215ENST00000487332 ATP6V1HQ9UI12 483 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 ABCG2Q9UNQ0 655 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 MAPRE3Q9UPY8 281 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 C15orf41Q9Y2V0 281 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 FIS1Q9Y3D6 152 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 RAP2CQ9Y3L5 183 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 LIPGQ9Y5X9 500 aa9.41□□□□□ -0.9
RNF220-215ENST00000487332 TRGV5A0A0B4J1U4 118 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 A1L4Q6 167 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 PRAMEF25A6NGN4 478 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 FAM47E-STBD1D6RA91 191 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 G3V3Y1 287 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 UPK1AO00322 258 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 SNPHO15079 494 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 SCAMP2O15127 329 aaKnown RBP9.4□□□□□ -0.9
RNF220-215ENST00000487332 UGT2B11O75310 529 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 HSPA4LO95757 839 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 JUNP05412 331 aaKnown RBP9.4□□□□□ -0.9
RNF220-215ENST00000487332 TPOP07202 933 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 GABRA1P14867 456 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 ENDOUP21128 410 aaKnown RBP9.4□□□□□ -0.9
RNF220-215ENST00000487332 PTPN6P29350 595 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 PTGDSP41222 190 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 MAP3K8P41279 467 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 MAN2A2P49641 1150 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 CDK9P50750 372 aaKnown RBP9.4□□□□□ -0.9
RNF220-215ENST00000487332 ABCE1P61221 599 aaKnown RBP9.4□□□□□ -0.9
RNF220-215ENST00000487332 CHI3L2Q15782 390 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 NNATQ16517 81 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 ZNF385BQ569K4 471 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 FNDC7Q5VTL7 733 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 ZCCHC12Q6PEW1 402 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 TMEM107Q6UX40 140 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 MRGPRGQ86SM5 289 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 PRR22Q8IZ63 422 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 PSMA8Q8TAA3 256 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 PPP1R14CQ8TAE6 165 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 NEIL3Q8TAT5 605 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 KAT2AQ92830 837 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 TSSK3Q96PN8 268 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 DEFB127Q9H1M4 99 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 METTL7AQ9H8H3 244 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 HHATLQ9HCP6 504 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 NEUROD4Q9HD90 331 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 Q9N2J8 555 aa9.4□□□□□ -0.9
RNF220-215ENST00000487332 MRTO4Q9UKD2 239 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms