RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 C10orf111Q8N326 155 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 EPYCQ99645 322 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 OR52A5Q9H2C5 316 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 PRTFDC1Q9NRG1 225 aa12.49□□□□□ -0.41
HMGN1-216ENST00000486741 CCDC182A6NF36 153 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ELOA3DA6NLF2 546 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 MCIDASD6RGH6 385 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 HMGN1P05114 100 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ATP5A1P25705 553 aaKnown RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 IL12BP29460 328 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 CLK3P49761 638 aaKnown RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 TPTEP56180 551 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 BNC1Q01954 994 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 EIF2B5Q13144 721 aaKnown RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ELOA3BQ3SY89 546 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 FAM111BQ6SJ93 734 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 TTLL10Q6ZVT0 673 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 IZUMO1Q8IYV9 350 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 PAPD5Q8NDF8 572 aaKnown RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ELOA3Q8NG57 546 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 PIK3R3Q92569 461 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 SECISBP2Q96T21 854 aaKnown RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 CDCA3Q99618 268 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 LMAN1LQ9HAT1 526 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 OR6C2Q9NZP2 312 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 CPNE7Q9UBL6 633 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 GPC6Q9Y625 555 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 CSNK1G3Q9Y6M4 447 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 TRIM64CA6NLI5 447 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 AGR2O95994 175 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 OSMP13725 252 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 F3P13726 295 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 GGT2P36268 569 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 SOX3P41225 446 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 GRK6P43250 576 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 CDKN3Q16667 212 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ODF4Q2M2E3 257 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 DEFB133Q30KQ1 61 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 PODNL1Q6PEZ8 512 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 JAZF1Q86VZ6 243 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 PTOV1Q86YD1 416 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 CYB561A3Q8NBI2 242 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ZDHHC1Q8WTX9 485 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 AP3S1Q92572 193 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 TIMM29Q9BSF4 260 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ASIC5Q9NY37 505 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 LIPT1Q9Y234 373 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 MGAMO43451 1857 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 WBP4O75554 376 aaKnown RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 RPP14O95059 124 aaKnown RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 GUCA1AP43080 201 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 RORCP51449 518 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ADPRHP54922 357 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 PPP2R2BQ00005 443 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 PIP5KL1Q5T9C9 394 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 C1orf189Q5VU69 101 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 C22orf42Q6IC83 251 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ZNF547Q8IVP9 402 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 HCAR2Q8TDS4 363 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 C5orf34Q96MH7 638 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 CITED4Q96RK1 184 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 MND1Q9BWT6 205 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 SPRTNQ9H040 489 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 MKKSQ9NPJ1 570 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 NAALAD2Q9Y3Q0 740 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 SLC9B1P1A6NJY1 282 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 FAM183AA6NL82 134 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ADAP00813 363 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 GNSP15586 552 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 DRD1P21728 446 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 GABARAPL2P60520 117 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ANKDD1AQ495B1 522 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 FBXO43Q4G163 708 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 CXXC5Q7LFL8 322 aaKnown RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 FAM220AQ7Z4H9 259 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 RIMKLAQ8IXN7 391 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ZFP3Q96NJ6 502 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 GFM1Q96RP9 751 aaKnown RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 ACTRT3Q9BYD9 372 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 CARD8Q9Y2G2 431 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 WBP11Q9Y2W2 641 aaKnown RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 PPIL1Q9Y3C6 166 aa12.48□□□□□ -0.41
HMGN1-216ENST00000486741 DNMT3AQ9Y6K1 912 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-216ENST00000486741 A0A1B0GVT2 93 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 FAM240BA0A1B0GVZ2 78 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 IGFBP1P08833 259 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-216ENST00000486741 CHMP24386 653 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 APOFQ13790 326 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 NFATC4Q14934 902 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 ZNF791Q3KP31 576 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-216ENST00000486741 TMEM196Q5HYL7 178 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 OAFQ86UD1 273 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 FAM160A2Q8N612 972 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-216ENST00000486741 OR9A4Q8NGU2 314 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 KCTD7Q96MP8 289 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 HDHD5Q9BXW7 423 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 A0A0G2JMZ2 1700 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 IRGMA1A4Y4 181 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 CHST10O43529 356 aa12.47□□□□□ -0.41
HMGN1-216ENST00000486741 AP1G1O43747 822 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms