RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 KLF10Q13118 480 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 DUSP8Q13202 625 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 LASP1Q14847 261 aaKnown RBP10.54□□□□□ -0.72
NUP50-216ENST00000486184 ZCCHC12Q6PEW1 402 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 SLC2A7Q6PXP3 512 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 PIGWQ7Z7B1 504 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 FUNDC1Q8IVP5 155 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 SLC44A2Q8IWA5 706 aaPredicted RBP10.54□□□□□ -0.72
NUP50-216ENST00000486184 GPALPP1Q8IXQ4 340 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 DND1Q8IYX4 353 aaKnown RBP10.54□□□□□ -0.72
NUP50-216ENST00000486184 CCDC197Q8NCU1 140 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 SIMC1Q8NDZ2 872 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 GOT1L1Q8NHS2 421 aaPredicted RBP10.54□□□□□ -0.72
NUP50-216ENST00000486184 GPR151Q8TDV0 419 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 TSPEARQ8WU66 669 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 SLC9A6Q92581 669 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 HSPBAP1Q96EW2 488 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 WBP1Q96G27 269 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 RASL10BQ96S79 203 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 RNF32Q9H0A6 362 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 Q9N2J8 555 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 HPF1Q9NWY4 346 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 ANKRD10Q9NXR5 420 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 PLA2G3Q9NZ20 509 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 ARMCX1Q9P291 453 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 MRTO4Q9UKD2 239 aaKnown RBP10.54□□□□□ -0.72
NUP50-216ENST00000486184 DTX4Q9Y2E6 619 aa10.54□□□□□ -0.72
NUP50-216ENST00000486184 CACNA1BQ00975 2339 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 OR5H15A6NDH6 313 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 BBIP1A8MTZ0 92 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 MAN1A2O60476 641 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 SOX30O94993 753 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 PSMG1O95456 288 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 KRT75O95678 551 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 F10P00742 488 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 HMGN2P05204 90 aaKnown RBP10.53□□□□□ -0.72
NUP50-216ENST00000486184 GSNP06396 782 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 CAPN3P20807 821 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 DRD5P21918 477 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 IL12BP29460 328 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 SOX18P35713 384 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 SOX3P41225 446 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 KHKP50053 298 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 PSMD4P55036 377 aaKnown RBP10.53□□□□□ -0.72
NUP50-216ENST00000486184 CORO7P57737 925 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 RPP38P78345 283 aaKnown RBP10.53□□□□□ -0.72
NUP50-216ENST00000486184 PLCXD2Q0VAA5 305 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 STX5Q13190 355 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 CYLC2Q14093 348 aaPredicted RBP10.53□□□□□ -0.72
NUP50-216ENST00000486184 LY6DQ14210 128 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 PIGGQ5H8A4 983 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 MFSD12Q6NUT3 480 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 IL20RBQ6UXL0 311 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 C16orf47Q6ZP98 133 aaPredicted RBP10.53□□□□□ -0.72
NUP50-216ENST00000486184 C6orf120Q7Z4R8 191 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 SLC34A3Q8N130 599 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 CYP4Z2PQ8N1L4 340 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 ARMC10Q8N2F6 343 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 DNAJB8Q8NHS0 232 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 FBXO30Q8TB52 745 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 BCAS4Q8TDM0 211 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 ADAMTS15Q8TE58 950 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 HAS2Q92819 552 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 ADIPOR1Q96A54 375 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 TMEM125Q96AQ2 219 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 C5orf34Q96MH7 638 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 VSTM2LQ96N03 204 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 BTBD9Q96Q07 612 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 LRRC37BQ96QE4 947 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 NPAS2Q99743 824 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 YIPF4Q9BSR8 244 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 INPP5KQ9BT40 448 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 LMF2Q9BU23 707 aaKnown RBP10.53□□□□□ -0.72
NUP50-216ENST00000486184 ACTRT3Q9BYD9 372 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 NXF5Q9H1B4 397 aaKnown RBP10.53□□□□□ -0.72
NUP50-216ENST00000486184 SLC25A18Q9H1K4 315 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 NTMQ9P121 344 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 LRFN1Q9P244 771 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 GPR55Q9Y2T6 319 aaPredicted RBP10.53□□□□□ -0.72
NUP50-216ENST00000486184 PCDHGB3Q9Y5G1 929 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 ITPR1Q14643 2758 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 CELSR3Q9NYQ7 3312 aa10.53□□□□□ -0.72
NUP50-216ENST00000486184 EML6Q6ZMW3 1958 aa10.52□□□□□ -0.72
NUP50-216ENST00000486184 EPG5Q9HCE0 2579 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 A0A096LPI6 279 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 TMEM200CA6NKL6 621 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 DUXAA6NLW8 204 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 TP53I11O14683 189 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 ATXN7O15265 892 aaPredicted RBP10.52□□□□□ -0.73
NUP50-216ENST00000486184 NME6O75414 186 aaPredicted RBP10.52□□□□□ -0.73
NUP50-216ENST00000486184 REM1O75628 298 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 CD46P15529 392 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 MATN1P21941 496 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 GABRA3P34903 492 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 TRHRP34981 398 aaPredicted RBP10.52□□□□□ -0.73
NUP50-216ENST00000486184 CDKN2CP42773 168 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 RFX3P48380 749 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 ST13P50502 369 aaKnown RBP10.52□□□□□ -0.73
NUP50-216ENST00000486184 HLCSP50747 726 aa10.52□□□□□ -0.73
NUP50-216ENST00000486184 MRPS22P82650 360 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms