RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	MISP	Q8IVT2	679 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	APLF	Q8IW19	511 aa	Predicted RBP	3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	DND1	Q8IYX4	353 aa	Known RBP	3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	CIART	Q8N365	385 aa	Predicted RBP	3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	CERS5	Q8N5B7	392 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	GVQW1	Q8N7I0	195 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	MLKL	Q8NB16	471 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	ZNF485	Q8NCK3	441 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	DENND6B	Q8NEG7	585 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	DDHD1	Q8NEL9	900 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	TRIM58	Q8NG06	486 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	OR6F1	Q8NGZ6	308 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	RPLP0P6	Q8NHW5	317 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	GIPC3	Q8TF64	312 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	SMAP2	Q8WU79	429 aa	Predicted RBP	3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	CHPT1	Q8WUD6	406 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	PHYHIP	Q92561	330 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	VPS39	Q96JC1	886 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	CXorf58	Q96LI9	332 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	C2orf48	Q96LS8	159 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	DUX3	Q96PT4	197 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	ERGIC2	Q96RQ1	377 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	PIGQ	Q9BRB3	760 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	DCTN5	Q9BTE1	182 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	GFRA4	Q9GZZ7	299 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	MED20	Q9H944	212 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	NMUR1	Q9HB89	426 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	KLK11	Q9UBX7	282 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	DIMT1	Q9UNQ2	313 aa	Known RBP	3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	PLCL2	Q9UPR0	1127 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	CHMP2B	Q9UQN3	213 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	RNF215	Q9Y6U7	377 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	ARID2	Q68CP9	1835 aa		3.35	□□□□□ -1.87
VPS8-223	ENST00000485024	ABCC6	O95255	1503 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	SMCHD1	A6NHR9	2005 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	ITPR3	Q14573	2671 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	ITSN1	Q15811	1721 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	CDC42BPA	Q5VT25	1732 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024		A0A0U1RRA0	63 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	FAM230A	A0A1W2PPH8	454 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	HHLA1	C9JL84	531 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	LMO7DN	F2Z398	122 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	LGALS8	O00214	317 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	SMPD2	O60906	423 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	TOM1L1	O75674	476 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	ANGPTL1	O95841	491 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	IFNB1	P01574	187 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	RPLP0	P05388	317 aa	Known RBP	3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	GPX3	P22352	226 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	AKT2	P31751	481 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	TIMP3	P35625	211 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	CRYBA2	P53672	197 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	CSNK2B	P67870	215 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	HSF2	Q03933	536 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	HAGH	Q16775	308 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024		Q71RC1	249 aa	Predicted RBP	3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	BNIPL	Q7Z465	357 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	LCA5	Q86VQ0	697 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	BCORP1	Q8N888	145 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	TMEM37	Q8WXS4	190 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	TMEM190	Q8WZ59	177 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	AZIN2	Q96A70	460 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	TMEM45B	Q96B21	275 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	GMPPA	Q96IJ6	420 aa	Predicted RBP	3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	F2RL3	Q96RI0	385 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	USP28	Q96RU2	1077 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	RAB40C	Q96S21	281 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	TPPP3	Q9BW30	176 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	CLEC7A	Q9BXN2	247 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	FNDC4	Q9H6D8	234 aa	Predicted RBP	3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	ROPN1	Q9HAT0	212 aa	Predicted RBP	3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	POLD4	Q9HCU8	107 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	B3GAT2	Q9NPZ5	323 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	FARSB	Q9NSD9	589 aa	Known RBP	3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	PPP1R3C	Q9UQK1	317 aa		3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	CNOT1	A5YKK6	2376 aa	Known RBP	3.34	□□□□□ -1.87
VPS8-223	ENST00000485024	FLT4	P35916	1363 aa		3.34	□□□□□ -1.88
VPS8-223	ENST00000485024	KIF24	Q5T7B8	1368 aa		3.34	□□□□□ -1.88
VPS8-223	ENST00000485024	CCNB3	Q8WWL7	1395 aa		3.34	□□□□□ -1.88
VPS8-223	ENST00000485024	RAB3GAP2	Q9H2M9	1393 aa		3.34	□□□□□ -1.88
VPS8-223	ENST00000485024	HTT	P42858	3142 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	GREB1L	Q9C091	1923 aa	Predicted RBP	3.33	□□□□□ -1.88
VPS8-223	ENST00000485024		A0A1B0GWJ7	208 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	ANKRD30BL	A7E2S9	258 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	MEI4	A8MW99	385 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	TRAFD1	O14545	582 aa	Predicted RBP	3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	SIGLEC5	O15389	551 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	TNFSF12	O43508	249 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	TSPAN2	O60636	221 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	VPS26A	O75436	327 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	AK1	P00568	194 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	KRT8	P05787	483 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	FCER2	P06734	321 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	CALCB	P10092	127 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	CEACAM1	P13688	526 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	DPP4	P27487	766 aa		3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	FCGR2B	P31994	310 aa	Predicted RBP	3.33	□□□□□ -1.88
VPS8-223	ENST00000485024	FCGR2C	P31995	323 aa		3.33	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms