RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 NPRL2Q8WTW4 380 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 PCNPQ8WW12 178 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 SHC3Q92529 594 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 TMEM45BQ96B21 275 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 RBM18Q96H35 190 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 ARL5BQ96KC2 179 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 ATP6V1G3Q96LB4 118 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 SAMD8Q96LT4 415 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 C1orf147Q96MC9 270 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 CATSPER2Q96P56 530 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 RANBP9Q96S59 729 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 COQ7Q99807 217 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 CBWD1Q9BRT8 395 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 TTYH2Q9BSA4 534 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 OSBPL10Q9BXB5 764 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 MOB1AQ9H8S9 216 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 Q9HAA7 133 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 KCNK13Q9HB14 408 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 FANCEQ9HB96 536 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 PARVGQ9HBI0 331 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 GDF3Q9NR23 364 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 CNOT2Q9NZN8 540 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 NDUFA13Q9P0J0 144 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 COX16Q9P0S2 106 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 MBD2Q9UBB5 411 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 SPASTQ9UBP0 616 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 EXTL2Q9UBQ6 330 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 MIOXQ9UGB7 285 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 MLXQ9UH92 298 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 IL20RAQ9UHF4 553 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 ATPIF1Q9UII2 106 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 PIN4Q9Y237 131 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 SLC6A5Q9Y345 797 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 ATG4BQ9Y4P1 393 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 AP1M2Q9Y6Q5 423 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 UBE4BO95155 1302 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 COL5A2P05997 1499 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 LOC100653049A0A140TA62 436 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 A0A1B0GUA9 196 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 A0A1B0GUL7 405 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 IQCMA0A1B0GVH7 501 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 RNF222A6NCQ9 220 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 CFAP73A6NFT4 308 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 ASB14A6NK59 587 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 NEDD8-MDP1E9PL57 170 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 E9PMD0 336 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 GOLGA8SH3BPF8 625 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 CHEK1O14757 476 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 LSM1O15116 133 aaKnown RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 POLR2DO15514 142 aaKnown RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 ZNF254O75437 659 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 CRTAPO75718 401 aaPredicted RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 KRT34O76011 436 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 ERLIN2O94905 339 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 SYNGR4O95473 234 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 POP4O95707 220 aaKnown RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 PDGFBP01127 241 aaPredicted RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 TGFAP01135 160 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 IGHV3-13P01766 116 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 IGHV3-9P01782 118 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 SFTPBP07988 381 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 RPSAP08865 295 aaKnown RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 GSTA2P09210 222 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 OR9G9P0C7N8 305 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 UBTFL6P0CB48 400 aaPredicted RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 ADORA3P0DMS8 318 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 EPB41P11171 864 aaKnown RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 CCNA2P20248 432 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 ZNF10P21506 573 aaPredicted RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 SHC1P29353 583 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 PRDX6P30041 224 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 HSD17B2P37059 387 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 ALDH3B1P43353 468 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 SLC6A8P48029 635 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 SLC1A6P48664 564 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 NPY2RP49146 381 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 FNTAP49354 379 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 PGFP49763 221 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 SGSHP51688 502 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 ATXN3P54252 364 aaPredicted RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 VCPP55072 806 aaKnown RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 PEX3P56589 373 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 CTAG1AP78358 180 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 GALK2Q01415 458 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 CYLC2Q14093 348 aaPredicted RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 DPYSQ14117 519 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 FASTKQ14296 549 aaKnown RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 STK11Q15831 433 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 HAGHQ16775 308 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 CEP55Q53EZ4 464 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 AGKQ53H12 422 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 C1orf189Q5VU69 101 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 AADACL4Q5VUY2 407 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 LIPKQ5VXJ0 399 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 ZNF772Q68DY9 489 aaPredicted RBP1.79□□□□□ -2.12
ITGB1-213ENST00000484088 OR6B2Q6IFH4 312 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 FAM159AQ6UWV7 190 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 MFSD7Q6UXD7 560 aa1.79□□□□□ -2.12
ITGB1-213ENST00000484088 LPCAT2Q7L5N7 544 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms