RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 LIPCP11150 499 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 ETFAP13804 333 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 ETS2P15036 469 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 TCN1P20061 433 aaPredicted RBP9.46□□□□□ -0.9
USP39-215ENST00000481409 DRD5P21918 477 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 KDELR2P33947 212 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 SOX18P35713 384 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 PPICP45877 212 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 EMDP50402 254 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 PSMD4P55036 377 aaKnown RBP9.46□□□□□ -0.9
USP39-215ENST00000481409 CLDN6P56747 220 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 SLC37A1P57057 533 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 ELF3P78545 371 aaPredicted RBP9.46□□□□□ -0.9
USP39-215ENST00000481409 MRPS35P82673 323 aaKnown RBP9.46□□□□□ -0.9
USP39-215ENST00000481409 HPCAP84074 193 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 CDK6Q00534 326 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 RHDQ02161 417 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 EEF1A2Q05639 463 aaKnown RBP9.46□□□□□ -0.9
USP39-215ENST00000481409 DNASE1L3Q13609 305 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 SCARB2Q14108 478 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 ZSWIM7Q19AV6 140 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 ARHGAP11BQ3KRB8 267 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 CYP27C1Q4G0S4 372 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 SFT2D3Q587I9 215 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 CRB2Q5IJ48 1285 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 COX20Q5RI15 118 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 LCN10Q6JVE6 187 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 HEPHL1Q6MZM0 1159 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 LRRC74BQ6ZQY2 392 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 SLC29A4Q7RTT9 530 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 TIPARPQ7Z3E1 657 aaKnown RBP9.46□□□□□ -0.9
USP39-215ENST00000481409 KRT73Q86Y46 540 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 RAB43Q86YS6 212 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 KBTBD2Q8IY47 623 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 HORMAD2Q8N7B1 307 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 ENDOVQ8N8Q3 282 aaKnown RBP9.46□□□□□ -0.9
USP39-215ENST00000481409 CHDHQ8NE62 594 aaPredicted RBP9.46□□□□□ -0.9
USP39-215ENST00000481409 B3GNT7Q8NFL0 401 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 OR5L2Q8NGL0 311 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 BBS10Q8TAM1 723 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 NUBPLQ8TB37 319 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 M1APQ8TC57 530 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 SLC2A12Q8TD20 617 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 ZNF721Q8TF20 911 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 CT55Q8WUE5 264 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 STMN2Q93045 179 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 TSLPQ969D9 159 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 CCDC124Q96CT7 223 aaKnown RBP9.46□□□□□ -0.9
USP39-215ENST00000481409 VMP1Q96GC9 406 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 MAGED4Q96JG8 741 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 VSTM2LQ96N03 204 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 BTBD9Q96Q07 612 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 OR7D2Q96RA2 312 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 ZNF607Q96SK3 696 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 G6PC3Q9BUM1 346 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 CNPPD1Q9BV87 410 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 ZNF700Q9H0M5 742 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 Q9N2J8 555 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 ASCL3Q9NQ33 180 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 ERVK-19Q9WJR5 959 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 RIF1Q5UIP0 2472 aaKnown RBP9.46□□□□□ -0.9
USP39-215ENST00000481409 ZNF292O60281 2723 aa9.46□□□□□ -0.9
USP39-215ENST00000481409 SCN2AQ99250 2005 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 TCRBV3S1A0A5B6 114 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 FRG2CA6NGY1 282 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 AGRPO00253 132 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 ARPC2O15144 300 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 TO15178 435 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 CNOT3O75175 753 aaKnown RBP9.45□□□□□ -0.9
USP39-215ENST00000481409 SERPINB7O75635 380 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 C8BP07358 591 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 UMODP07911 640 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 OR12D1P0DN82 309 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 NR2F1P10589 423 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 TRHRP34981 398 aaPredicted RBP9.45□□□□□ -0.9
USP39-215ENST00000481409 GPR143P51810 404 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 PGDP52209 483 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 PCBP3P57721 371 aaKnown RBP9.45□□□□□ -0.9
USP39-215ENST00000481409 MS4A2Q01362 244 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 ZNF155Q12901 538 aaPredicted RBP9.45□□□□□ -0.9
USP39-215ENST00000481409 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 CRTC2Q53ET0 693 aaPredicted RBP9.45□□□□□ -0.9
USP39-215ENST00000481409 HLA-DQA1Q5Y7H0 255 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 TNFAIP8L2Q6P589 184 aaPredicted RBP9.45□□□□□ -0.9
USP39-215ENST00000481409 FAM199XQ6PEV8 388 aaPredicted RBP9.45□□□□□ -0.9
USP39-215ENST00000481409 PAPD4Q6PIY7 484 aaKnown RBP9.45□□□□□ -0.9
USP39-215ENST00000481409 NDUFAF7Q7L592 441 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 C16orf62Q7Z3J2 963 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 PRSS58Q8IYP2 241 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 RNF148Q8N7C7 305 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 NFAM1Q8NET5 270 aaPredicted RBP9.45□□□□□ -0.9
USP39-215ENST00000481409 C16orf52Q8NHV5 167 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 PNPT1Q8TCS8 783 aaKnown RBP9.45□□□□□ -0.9
USP39-215ENST00000481409 XAGE5Q8WWM1 108 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 LZICQ8WZA0 190 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 NKD1Q969G9 470 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 HSPBAP1Q96EW2 488 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 UGT2B28Q9BY64 529 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 SAP130Q9H0E3 1048 aa9.45□□□□□ -0.9
USP39-215ENST00000481409 DENND2DQ9H6A0 471 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms