RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 METTL25Q8N6Q8 603 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 ANKS4BQ8N8V4 417 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 ADIPOR1Q96A54 375 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 ZBTB8AQ96BR9 441 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 RADILQ96JH8 1075 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 TCF12Q99081 682 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 GPR21Q99679 349 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 PRRG4Q9BZD6 226 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 GOLPH3Q9H4A6 298 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 MYOZ1Q9NP98 299 aaPredicted RBP10.49□□□□□ -0.73
USP11-208ENST00000480104 DDX28Q9NUL7 540 aaKnown RBP10.49□□□□□ -0.73
USP11-208ENST00000480104 HIF1ANQ9NWT6 349 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 EHD3Q9NZN3 535 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 DHRS7Q9Y394 339 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 MRPS18CQ9Y3D5 142 aaKnown RBP10.49□□□□□ -0.73
USP11-208ENST00000480104 DYRK1BQ9Y463 629 aa10.49□□□□□ -0.73
USP11-208ENST00000480104 PCLOQ9Y6V0 5065 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 GOLGA8QA0A0J9YX86 632 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 GOLGA8OA6NCC3 632 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 GOLGA8NF8WBI6 632 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 GOLGA8MH3BSY2 632 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 GOLGA8RI6L899 631 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 PFDN6O15212 129 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 PRB2P02812 416 aaPredicted RBP10.48□□□□□ -0.73
USP11-208ENST00000480104 C8GP07360 202 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 MGAT1P26572 445 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 AGTR1P30556 359 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 RPS3AP61247 264 aaKnown RBP10.48□□□□□ -0.73
USP11-208ENST00000480104 UBE2HP62256 183 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 HMGCS1Q01581 520 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 SRSF4Q08170 494 aaKnown RBP10.48□□□□□ -0.73
USP11-208ENST00000480104 SP140Q13342 867 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP11-208ENST00000480104 UGT3A1Q6NUS8 523 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 ZNF549Q6P9A3 640 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 TFAP2EQ6VUC0 442 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 CENPUQ71F23 418 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 ST13P4Q8IZP2 240 aaPredicted RBP10.48□□□□□ -0.73
USP11-208ENST00000480104 BBOF1Q8ND07 529 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 C7orf57Q8NEG2 295 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 KCNJ9Q92806 393 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 RIT1Q92963 219 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 MTBPQ96DY7 904 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 CCT8L2Q96SF2 557 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 NXF5Q9H1B4 397 aaKnown RBP10.48□□□□□ -0.73
USP11-208ENST00000480104 PRDM7Q9NQW5 492 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 ACSS1Q9NUB1 689 aaPredicted RBP10.48□□□□□ -0.73
USP11-208ENST00000480104 ZNF337Q9Y3M9 751 aa10.48□□□□□ -0.73
USP11-208ENST00000480104 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.47□□□□□ -0.73
USP11-208ENST00000480104 LOC105371242A0A075B767 164 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 ERI2A8K979 691 aaKnown RBP10.47□□□□□ -0.73
USP11-208ENST00000480104 C17orf51A8MQB3 221 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 B4DSR2 109 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 H3BML4 177 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 UGT2B11O75310 529 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 PDE5AO76074 875 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 CPN2P22792 545 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 PHC1P78364 1004 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 SGCBQ16585 318 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 PCID2Q5JVF3 399 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 ADNP2Q6IQ32 1131 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 MFSD12Q6NUT3 480 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 CES3Q6UWW8 571 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 C1orf229Q6ZS94 237 aaPredicted RBP10.47□□□□□ -0.73
USP11-208ENST00000480104 BHLHA15Q7RTS1 189 aaPredicted RBP10.47□□□□□ -0.73
USP11-208ENST00000480104 NUP54Q7Z3B4 507 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 VN1R5Q7Z5H4 357 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 BPIFB2Q8N4F0 458 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 TTLQ8NG68 377 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 OR5M1Q8NGP8 315 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 KRT35Q92764 455 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 TAF15Q92804 592 aaKnown RBP eCLIP10.47□□□□□ -0.73
USP11-208ENST00000480104 TMEM186Q96B77 213 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 OMA1Q96E52 524 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 DTNBP1Q96EV8 351 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 SAP130Q9H0E3 1048 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 LPAR2Q9HBW0 351 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 GRIP1Q9Y3R0 1128 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 DNAH9Q9NYC9 4486 aa10.47□□□□□ -0.73
USP11-208ENST00000480104 TENM2Q9NT68 2774 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 M0QZ24 198 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 PRKRAO75569 313 aaKnown RBP10.46□□□□□ -0.73
USP11-208ENST00000480104 ZNF189O75820 626 aaPredicted RBP10.46□□□□□ -0.73
USP11-208ENST00000480104 SNUPNO95149 360 aaKnown RBP10.46□□□□□ -0.73
USP11-208ENST00000480104 ADAP00813 363 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 TUBBP07437 444 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 DHRS4L1P0CG22 281 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 OGNP20774 298 aaKnown RBP10.46□□□□□ -0.73
USP11-208ENST00000480104 SESN2P58004 480 aaPredicted RBP10.46□□□□□ -0.73
USP11-208ENST00000480104 MAP4K2Q12851 820 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 TRIP10Q15642 601 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 SLC18A3Q16572 532 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 TMIGD1Q6UXZ0 262 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 RHOT2Q8IXI1 618 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 PALM2Q8IXS6 379 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 ACOT4Q8N9L9 421 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 C17orf47Q8NEP4 570 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 OR2W6PQ8NHA6 318 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 EEF1AKMT1Q8WVE0 214 aa10.46□□□□□ -0.73
USP11-208ENST00000480104 FBXL8Q96CD0 374 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms