RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 NF1P21359 2839 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 TRBV5-3A0A0A0MS03 114 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 A0A1B0GUH1 482 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 A0A1W2PP18 115 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 OR10H2O60403 315 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 ZG16O60844 167 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 ERN1O75460 977 aaKnown RBP8.24□□□□□ -1.09
DDX56-211ENST00000479602 CDC123O75794 336 aaPredicted RBP8.24□□□□□ -1.09
DDX56-211ENST00000479602 CBX7O95931 251 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 LAMP1P11279 417 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 BMP2P12643 396 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 IL12AP29459 219 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 ART3Q13508 389 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 ELOAQ14241 798 aaKnown RBP8.24□□□□□ -1.09
DDX56-211ENST00000479602 INAQ16352 499 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 FAM174BQ3ZCQ3 159 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 SPANXN4Q5MJ08 99 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 TMEM198Q66K66 360 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 LINC00696Q6ZRV3 163 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 SLC5A8Q8N695 610 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 KRTCAP2Q8N6L1 136 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 TRIML2Q8N7C3 387 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 BCORP1Q8N888 145 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 ACBD4Q8NC06 268 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 BRIX1Q8TDN6 353 aaKnown RBP8.24□□□□□ -1.09
DDX56-211ENST00000479602 ITLN2Q8WWU7 325 aaPredicted RBP8.24□□□□□ -1.09
DDX56-211ENST00000479602 NR4A3Q92570 626 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 ELP4Q96EB1 424 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 HSPBAP1Q96EW2 488 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 GIMAP5Q96F15 307 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 SENP5Q96HI0 755 aaPredicted RBP8.24□□□□□ -1.09
DDX56-211ENST00000479602 TEX37Q96LM6 180 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 BBS4Q96RK4 519 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 STACQ99469 402 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 LMF2Q9BU23 707 aaKnown RBP8.24□□□□□ -1.09
DDX56-211ENST00000479602 YIPF2Q9BWQ6 316 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 RBCK1Q9BYM8 510 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 EPS8L2Q9H6S3 715 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 RMND5AQ9H871 391 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 SIRT3Q9NTG7 399 aaPredicted RBP8.24□□□□□ -1.09
DDX56-211ENST00000479602 THUMPD1Q9NXG2 353 aaKnown RBP8.24□□□□□ -1.09
DDX56-211ENST00000479602 PLA2G3Q9NZ20 509 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 ABI3Q9P2A4 366 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 MAP10Q9P2G4 905 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 BAIAP2L1Q9UHR4 511 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 DCTN4Q9UJW0 460 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 ARL2BPQ9Y2Y0 163 aa8.24□□□□□ -1.09
DDX56-211ENST00000479602 KLF2Q9Y5W3 355 aaPredicted RBP8.24□□□□□ -1.09
DDX56-211ENST00000479602 EXPH5Q8NEV8 1989 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 TRAV17A0A0B4J275 112 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 A0A1W2PRB8 838 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 FRG2CA6NGY1 282 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 TMEM200CA6NKL6 621 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 UPK1AO00322 258 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 HNRNPRO43390 633 aaKnown RBP8.23□□□□□ -1.09
DDX56-211ENST00000479602 EMC8O43402 210 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 ABCB7O75027 752 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 PRKRAO75569 313 aaKnown RBP8.23□□□□□ -1.09
DDX56-211ENST00000479602 ERAL1O75616 437 aaKnown RBP8.23□□□□□ -1.09
DDX56-211ENST00000479602 DCTN3O75935 186 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 ZFAND5O76080 213 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 WDPCPO95876 746 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 AGR2O95994 175 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 AK1P00568 194 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 NGFRP08138 427 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 CELA2AP08217 269 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 DRD5P21918 477 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 PPIBP23284 216 aaKnown RBP8.23□□□□□ -1.09
DDX56-211ENST00000479602 MST1P26927 711 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 S100A3P33764 101 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 PPICP45877 212 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 ALDH9A1P49189 494 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 TMED10P49755 219 aaKnown RBP8.23□□□□□ -1.09
DDX56-211ENST00000479602 EMDP50402 254 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 NCBP2P52298 156 aaKnown RBP eCLIP8.23□□□□□ -1.09
DDX56-211ENST00000479602 POLR2JP52435 117 aaKnown RBP8.23□□□□□ -1.09
DDX56-211ENST00000479602 SEC24CP53992 1094 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 UFM1P61960 85 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 RNF4P78317 190 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 PHC1P78364 1004 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 DUSP2Q05923 314 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 FADDQ13158 208 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 RPS6KA2Q15349 733 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 VPS26BQ4G0F5 336 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 MFSD4BQ5TF39 518 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 GKAP1Q5VSY0 366 aaPredicted RBP8.23□□□□□ -1.09
DDX56-211ENST00000479602 NXNQ6DKJ4 435 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 HACD2Q6Y1H2 254 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 HSDL2Q6YN16 418 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 RNF111Q6ZNA4 994 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 CPLX4Q7Z7G2 160 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 MMP21Q8N119 569 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 CDRT4Q8N9R6 151 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 GOLM1Q8NBJ4 401 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 OR7A2PQ8NGA2 310 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 GTF2H4Q92759 462 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 ADIPOR1Q96A54 375 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 EXOSC8Q96B26 276 aaKnown RBP8.23□□□□□ -1.09
DDX56-211ENST00000479602 SPDL1Q96EA4 605 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms