RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CSDE1O75534 798 aaKnown RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 MTRF1O75570 445 aaKnown RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 CNMDO75829 334 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 CLDN1O95832 211 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 B4GALT1P15291 398 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 AZU1P20160 251 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 GLRA1P23415 457 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 ACP1P24666 158 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 HNRNPFP52597 415 aaKnown RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 GSCP56915 257 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 EVCP57679 992 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 SRP54P61011 504 aaKnown RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 BTG1P62324 171 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCZ1BP86790 482 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCZ1P86791 482 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 GALK2Q01415 458 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 PPP1R8Q12972 351 aaKnown RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 HEPACAMQ14CZ8 416 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 PDK1Q15118 436 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR1C1Q15619 314 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 SHROOM1Q2M3G4 852 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 EPC2Q52LR7 807 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 HERC4Q5GLZ8 1057 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 TOR1AIP1Q5JTV8 583 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 PRAMEF7Q5VXH5 474 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 CAPN13Q6MZZ7 669 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 C3P1Q6ZMU1 363 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 SH2D6Q7Z4S9 175 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 GPR142Q7Z601 462 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 CACUL1Q86Y37 369 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 GMCL1P1Q8NEA9 526 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 TMEM185AQ8NFB2 350 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 NSMCE3Q96MG7 304 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 GPR137Q96N19 417 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 ERGIC2Q96RQ1 377 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 USP28Q96RU2 1077 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 SPAG8Q99932 426 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 OPRPNQ99935 248 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 AGPAT1Q99943 283 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 PINK1Q9BXM7 581 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 HSD3B7Q9H2F3 369 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 DPEP3Q9H4B8 488 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 RPAP3Q9H6T3 665 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 DCLRE1BQ9H816 532 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 BARHL2Q9NY43 387 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 CACNG5Q9UF02 275 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 DNPEPQ9ULA0 475 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCPG1Q9ULG6 757 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 PIN4Q9Y237 131 aaKnown RBP3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 MYH11P35749 1972 aa3.38□□□□□ -1.87
CDC42BPA-212ENST00000478573 IGHV3-20A0A0C4DH32 117 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 A0A0D9SFI3 127 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 MACROD2A1Z1Q3 448 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 KRT87PA6NCN2 255 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 MPTX1A8MV57 137 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 ANHXE9PGG2 379 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 CHEK1O14757 476 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 TNFSF12O43508 249 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 PRPSAP2O60256 369 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 NME2P1O60361 137 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 ATP6V1G1O75348 118 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 NXPH4O95158 308 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 SLC25A27O95847 323 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 TXNDC12O95881 172 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 SLC4A1P02730 911 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCL5P13501 91 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 MAPK3P27361 379 aaPredicted RBP3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 SFNP31947 248 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 ALDH3B1P43353 468 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 TNFRSF4P43489 277 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 SLC6A12P48065 614 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 FHITP49789 147 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 CSRP3P50461 194 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 DRP2Q13474 957 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 RFTN2Q52LD8 501 aaPredicted RBP3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 NKAIN2Q5VXU1 208 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 CES4AQ5XG92 561 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 ADAMTSL2Q86TH1 951 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 NEK11Q8NG66 645 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR9Q2Q8NGE9 314 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR6M1Q8NGM8 313 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR10G7Q8NGN6 311 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 RPLP0P6Q8NHW5 317 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 GOLGA5Q8TBA6 731 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 ACER1Q8TDN7 264 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 GPR148Q8TDV2 347 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 DYNLL2Q96FJ2 89 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZNF274Q96GC6 653 aaPredicted RBP3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 SYT15Q9BQS2 421 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 XPO4Q9C0E2 1151 aaKnown RBP3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 DDX47Q9H0S4 455 aaKnown RBP3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 PORCNQ9H237 461 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 C1orf21Q9H246 121 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 C3orf14Q9HBI5 128 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 GPN1Q9HCN4 374 aaPredicted RBP3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 DDX28Q9NUL7 540 aaKnown RBP3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 MED17Q9NVC6 651 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 TECRQ9NZ01 308 aaKnown RBP3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 NINJ2Q9NZG7 142 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 KLK11Q9UBX7 282 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms