RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ATP8B1O43520 1251 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 PEX1O43933 1283 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 ERN1O75460 977 aaKnown RBP9.46□□□□□ -0.9
HDAC6-222ENST00000478095 SLITRK5O94991 958 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 ABCB1P08183 1280 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-222ENST00000478095 FBXO45P0C2W1 286 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 ABCD3P28288 659 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 PIGAP37287 484 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 UQCRFS1P47985 274 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 IDH3AP50213 366 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 MEOX1P50221 254 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 C21orf58P58505 322 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 UFM1P61960 85 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 GUCY1A3Q02108 690 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 SF3A3Q12874 501 aaKnown RBP eCLIP9.46□□□□□ -0.91e-7■■■□□ 16.4
HDAC6-222ENST00000478095 INAQ16352 499 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 LSM12Q3MHD2 195 aaKnown RBP9.46□□□□□ -0.9
HDAC6-222ENST00000478095 SPANXN4Q5MJ08 99 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 DESI1Q6ICB0 168 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 EPGNQ6UW88 154 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 NPSR1Q6W5P4 371 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 RGS9BPQ6ZS82 235 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 ACAD11Q709F0 780 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 SLC44A2Q8IWA5 706 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-222ENST00000478095 CLECL1Q8IZS7 167 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 CPSF7Q8N684 471 aaKnown RBP9.46□□□□□ -0.9
HDAC6-222ENST00000478095 SLC15A4Q8N697 577 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 ARFGAP2Q8N6H7 521 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 BCORP1Q8N888 145 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 C17orf47Q8NEP4 570 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 ACTRT2Q8TDY3 377 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 FAR1Q8WVX9 515 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 OMA1Q96E52 524 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 OTUB1Q96FW1 271 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-222ENST00000478095 LCORQ96JN0 433 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-222ENST00000478095 FRMD6Q96NE9 622 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 BTBD9Q96Q07 612 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 BHLHE41Q9C0J9 482 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-222ENST00000478095 CXorf36Q9H7Y0 433 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 NPHS2Q9NP85 383 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 AGPAT4Q9NRZ5 378 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 SIRT3Q9NTG7 399 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-222ENST00000478095 OLAHQ9NV23 265 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 VPS4AQ9UN37 437 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 GPR55Q9Y2T6 319 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-222ENST00000478095 KLF13Q9Y2Y9 288 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-222ENST00000478095 PCDHGB6Q9Y5F9 930 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 SNX8Q9Y5X2 465 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 NPFFR2Q9Y5X5 522 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 GPR45Q9Y5Y3 372 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 DOCK10Q96BY6 2186 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 CDK2AP1O14519 115 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 UBDO15205 165 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 POLR3GO15318 223 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-222ENST00000478095 CFLARO15519 480 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 EDF1O60869 148 aaKnown RBP9.45□□□□□ -0.9
HDAC6-222ENST00000478095 WISP2O76076 250 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 PSMG1O95456 288 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 P04436 131 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 CT45A8P0DMV1 189 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 CT45A9P0DMV2 189 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 IDO1P14902 403 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 DRD5P21918 477 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 GNLYP22749 145 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 MST1P26927 711 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 IL12AP29459 219 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 SOAT1P35610 550 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 KIR3DL1P43629 444 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 PPICP45877 212 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 DNASE1L1P49184 302 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 TMED10P49755 219 aaKnown RBP9.45□□□□□ -0.9
HDAC6-222ENST00000478095 DGKQP52824 942 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 CLNS1AP54105 237 aaKnown RBP9.45□□□□□ -0.9
HDAC6-222ENST00000478095 WNT3P56703 355 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 PSG6Q00889 435 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 MRPL49Q13405 166 aaKnown RBP9.45□□□□□ -0.9
HDAC6-222ENST00000478095 RPS6KA2Q15349 733 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 NTRK2Q16620 822 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 FAM174BQ3ZCQ3 159 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 SPDYE7PQ495Y7 208 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 CT45A2Q5DJT8 189 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 BICRALQ6AI39 1079 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 CAMKMTQ7Z624 323 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 ANKRD46Q86W74 232 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 CLEC4FQ8N1N0 589 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 GOLM1Q8NBJ4 401 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 FAM98AQ8NCA5 519 aaKnown RBP9.45□□□□□ -0.9
HDAC6-222ENST00000478095 NUP43Q8NFH3 380 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 OR4N2Q8NGD1 307 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 OR5AK3PQ8NH89 298 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 CEP70Q8NHQ1 597 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 RFWD2Q8NHY2 731 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 PAQR8Q8TEZ7 354 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 OR5P2Q8WZ92 322 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 TMBIM1Q969X1 311 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 FAM120BQ96EK7 910 aaKnown RBP9.45□□□□□ -0.9
HDAC6-222ENST00000478095 SGCZQ96LD1 299 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 MS4A4EQ96PG1 132 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 YIPF4Q9BSR8 244 aa9.45□□□□□ -0.9
HDAC6-222ENST00000478095 CLMPQ9H6B4 373 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms