RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 KBTBD8Q8NFY9 601 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 NDNFQ8TB73 568 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 SPPL3Q8TCT6 385 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CXorf40AQ8TE69 158 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 SNRNP27Q8WVK2 155 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 RASSF5Q8WWW0 418 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ING5Q8WYH8 240 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 SMPDL3AQ92484 453 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 GGHQ92820 318 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CIDECQ96AQ7 238 aaPredicted RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 LGALS12Q96DT0 336 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ZHX1-C8orf76Q96EF9 292 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 NEURL3Q96EH8 262 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 PDXPQ96GD0 296 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 COX14Q96I36 57 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 RCC1LQ96I51 464 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 RIPOR3Q96MK2 946 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ZSWIM3Q96MP5 696 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 FAM210AQ96ND0 272 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 COL21A1Q96P44 957 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 MYOCQ99972 504 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 MS4A8Q9BY19 250 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 HDAC8Q9BY41 377 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 DCSTAMPQ9H295 470 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 SPNS1Q9H2V7 528 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 MMP27Q9H306 513 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 A4GALTQ9NPC4 353 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 WASH6PQ9NQA3 447 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 RASSF1Q9NS23 344 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CLN6Q9NWW5 311 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 IMPAD1Q9NX62 359 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ZSCAN32Q9NX65 697 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 GFOD1Q9NXC2 390 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF226Q9NYT6 803 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 CNOT2Q9NZN8 540 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TAAR2Q9P1P5 351 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 DEC1Q9P2X7 70 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 AASSQ9UDR5 926 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 DAPK2Q9UIK4 370 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 OSGIN1Q9UJX0 560 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ADAM29Q9UKF5 820 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ACSL6Q9UKU0 697 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TMCC3Q9ULS5 477 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 ASF1AQ9Y294 204 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 GPR55Q9Y2T6 319 aaPredicted RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 TDRKHQ9Y2W6 561 aaKnown RBP4.67□□□□□ -1.66
SF3B6-202ENST00000478050 SH3GLB1Q9Y371 365 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 A3GALT2U3KPV4 340 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 MYO15AQ9UKN7 3530 aa4.67□□□□□ -1.66
SF3B6-202ENST00000478050 PRAMEF33A0A0G2JMD5 474 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ISPDA4D126 451 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 TMEM247A6NEH6 219 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 METTL15A6NJ78 407 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 SAGE2PA6NJ88 616 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ZAR1LA6NP61 321 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 NOTOA8MTQ0 251 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 GPR89AB7ZAQ6 455 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 PRRT4C9JH25 899 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 SAP18O00422 153 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 FAAHO00519 579 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 PLPP1O14494 284 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 NDUFS4O43181 175 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 PRICKLE3O43900 615 aaPredicted RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 AIREO43918 545 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 PRAMEF10O60809 474 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 CNOT3O75175 753 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 RASGRP1O95267 797 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ADAP00813 363 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 GBAP04062 536 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 RPLP0P05388 317 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 GPR89BP0CG08 455 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 PIPP12273 146 aaPredicted RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 PNLIPP16233 465 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 PORP16435 677 aaPredicted RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 GABRB1P18505 474 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 TNFRSF1BP20333 461 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 TEAD1P28347 426 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ALDH4A1P30038 563 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 BSGP35613 385 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 IGFALSP35858 605 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 FRKP42685 505 aaPredicted RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 OR1E2P47887 323 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 IDH2P48735 452 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ANXA11P50995 505 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 PPP5CP53041 499 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 MAPK12P53778 367 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 CRISP1P54107 249 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 MANFP55145 182 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 GFRA1P56159 465 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 SMIM11AP58511 58 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 NCS1P62166 190 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 LSM3P62310 102 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 TRA2BP62995 288 aaKnown RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 MEF2AQ02078 507 aaPredicted RBP4.66□□□□□ -1.66
SF3B6-202ENST00000478050 RELAQ04206 551 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 DGCR6Q14129 220 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 ZNF234Q14588 700 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 IRF3Q14653 427 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 MLC1Q15049 377 aa4.66□□□□□ -1.66
SF3B6-202ENST00000478050 OXA1LQ15070 435 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms