RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 FHP07954 510 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 PRPS2P11908 318 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 ANXA3P12429 323 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 CEBPBP17676 345 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TPH1P17752 444 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 GKP32189 559 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 SDC2P34741 201 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 CTSCP53634 463 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 PNLIPRP2P54317 469 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 EPHB3P54753 998 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 WNT4P56705 351 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 SCAND1P57086 179 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 FUT5Q11128 374 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 DUSP4Q13115 394 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 OPCMLQ14982 345 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TAF1AQ15573 450 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 ZNF772Q68DY9 489 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 DMKNQ6E0U4 476 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 TBC1D3CQ6IPX1 549 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 CORO6Q6QEF8 472 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 VITQ6UXI7 678 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 NUDT18Q6ZVK8 323 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 DNAJB7Q7Z6W7 309 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 SERINC5Q86VE9 423 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 RNF135Q8IUD6 432 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 FAM217AQ8IXS0 508 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 RGL4Q8IZJ4 473 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TBC1D3Q8IZP1 549 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 PUSL1Q8N0Z8 303 aaKnown RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 SYT14Q8NB59 555 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 GPR26Q8NDV2 337 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 NLGN2Q8NFZ4 835 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 RBM14Q96PK6 669 aaKnown RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 LYSMD1Q96S90 227 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 MTERF1Q99551 399 aaKnown RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 KCNS3Q9BQ31 491 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TCF25Q9BQ70 676 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TSEN34Q9BSV6 310 aaKnown RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 REXO4Q9GZR2 422 aaKnown RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 BRF2Q9HAW0 419 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 HAO2Q9NYQ3 351 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 NOTCH4Q99466 2003 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 LOC102723532A0A0G2JNH3 316 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 GLTPD2A6NH11 291 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TMEM189-UBE2V1I3L0A0 370 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 PTGESO14684 152 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 LRRTM2O43300 516 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 PRKRAO75569 313 aaKnown RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 ITGA10O75578 1167 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 CBX7O95931 251 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 IL2RAP01589 272 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 WNT1P04628 370 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 CD1CP29017 333 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 NOS3P29474 1203 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 IL12RB1P42701 662 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TAP2Q03519 686 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 LRRC74AQ0VAA2 488 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 CSTF3Q12996 717 aaKnown RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 MAD2L1Q13257 205 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 ADAM15Q13444 863 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 SIM2Q14190 667 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 ZMYND11Q15326 602 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TSNQ15631 228 aaKnown RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 DRAM2Q6UX65 266 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 ZER1Q7Z7L7 766 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 GALNT5Q7Z7M9 940 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TAC4Q86UU9 113 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 PIANPQ8IYJ0 282 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 Q8N402 240 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 ZNF527Q8NB42 609 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 HJURPQ8NCD3 748 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 OR1M1Q8NGA1 313 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 OR56A4Q8NGH8 313 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 C10orf90Q96M02 699 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 MS4A4EQ96PG1 132 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 TMEM106CQ9BVX2 250 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 BEX2Q9BXY8 128 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 GPR63Q9BZJ6 419 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 PLEKHA2Q9HB19 425 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 FANCFQ9NPI8 374 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 DPP7Q9UHL4 492 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 ZNF223Q9UK11 482 aaPredicted RBP3.85□□□□□ -1.79
USP16-205ENST00000474835 TMCC3Q9ULS5 477 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 OR51B4Q9Y5P0 310 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 SNX8Q9Y5X2 465 aa3.85□□□□□ -1.79
USP16-205ENST00000474835 A0A087WUJ7 227 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 CCDC187A0A096LP49 1063 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 TRAV19A0A0A6YYK7 116 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 PRAMEF33A0A0G2JMD5 474 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 TCRBV16S1A1N1A0A5B0 115 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 OR2W5A6NFC9 320 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 ANXA2P2A6NMY6 339 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 ZNF724A8MTY0 619 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 ARHGEF33A8MVX0 844 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 NUDT19A8MXV4 375 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 C19orf81C9J6K1 198 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 H0YIV9 168 aa3.84□□□□□ -1.79
USP16-205ENST00000474835 PRAMEF10O60809 474 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms