RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 TIA1P31483 386 aaKnown RBP eCLIP18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 CEACAM8P31997 349 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 RAE1P78406 368 aaKnown RBP18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 MRPS35P82673 323 aaKnown RBP18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 ARSKQ6UWY0 536 aa18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 SEM1Q6ZVN7 128 aa18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 C16orf78Q8WTQ4 265 aa18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 ABTB1Q969K4 478 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 EXOSC8Q96B26 276 aaKnown RBP18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 APIPQ96GX9 242 aa18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 BTBD9Q96Q07 612 aa18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 RHOXF2Q9BQY4 288 aa18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 SIRT5Q9NXA8 310 aa18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 ZNF629Q9UEG4 869 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 CAMK2AQ9UQM7 478 aa18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 GPR55Q9Y2T6 319 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 SLC6A5Q9Y345 797 aa18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 L3MBTL1Q9Y468 752 aa18.59■□□□□ 0.57
PDLIM4-206ENST00000474421 ANKHD1Q8IWZ3 2542 aaKnown RBP18.58■□□□□ 0.57
PDLIM4-206ENST00000474421 PRAMEF25A6NGN4 478 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 SYT5O00445 386 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 ICOSLGO75144 302 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 UGT2B11O75310 529 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 GLRA3O75311 464 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 FAM153BP0C7A2 387 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 MYL2P10916 166 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 BMP7P18075 431 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 MPIP34949 423 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 SOX18P35713 384 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 HMGCS1Q01581 520 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 FAM153CQ494X1 144 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 EIPR1Q53HC9 387 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 NSUN5P2Q63ZY6 315 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 FAM180BQ6P0A1 224 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 SIMC1Q8NDZ2 872 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 FAM83FQ8NEG4 500 aaPredicted RBP18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 COL21A1Q96P44 957 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 NODALQ96S42 347 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 UGT2B28Q9BY64 529 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 STMN4Q9H169 189 aaPredicted RBP18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 GSTO2Q9H4Y5 243 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 MID1IP1Q9NPA3 183 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 SLC35C2Q9NQQ7 365 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 SENP1Q9P0U3 644 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 TBK1Q9UHD2 729 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 FOXD3Q9UJU5 478 aaPredicted RBP18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 EXO1Q9UQ84 846 aaKnown RBP18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 TIMM22Q9Y584 194 aa18.58■□□□□ 0.56
PDLIM4-206ENST00000474421 CD8B2A6NJW9 211 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 REM1O75628 298 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 CBR3O75828 277 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 ANXA4P09525 319 aaPredicted RBP18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 BMP5P22003 454 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 KRT20P35900 424 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 HTR6P50406 440 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 ASCL1P50553 236 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 DLX5P56178 289 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 EFR3AQ14156 821 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 RCAN2Q14206 197 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 CEBPEQ15744 281 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 SPDYAQ5MJ70 313 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 WIPI1Q5MNZ9 446 aaPredicted RBP18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 FAM9CQ8IZT9 166 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 CCNYL1Q8N7R7 359 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 EIF1ADQ8N9N8 165 aaKnown RBP18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 TNIP2Q8NFZ5 429 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 OR9A2Q8NGT5 310 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 MZB1Q8WU39 189 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 TMBIM1Q969X1 311 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 C11orf24Q96F05 449 aaPredicted RBP18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 WDYHV1Q96HA8 205 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 CALHM2Q9HA72 323 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 PPCSQ9HAB8 311 aa18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 WBP11Q9Y2W2 641 aaKnown RBP18.57■□□□□ 0.56
PDLIM4-206ENST00000474421 PLOD3O60568 738 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 SLITRK5O94991 958 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 UQCRC1P31930 480 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 PTGDSP41222 190 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 KIR2DL3P43628 341 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 MRPS22P82650 360 aaKnown RBP18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 BTKQ06187 659 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 ZNF763Q0D2J5 394 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 TESK1Q15569 626 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 IMPG1Q17R60 797 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 FBXL19-AS1Q494R0 122 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 CCDC153Q494R4 210 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 FAM219BQ5XKK7 198 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 ZYG11AQ6WRX3 759 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 SPNS3Q6ZMD2 512 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 KAT2AQ92830 837 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 RNASE6Q93091 150 aaKnown RBP18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 SLC35A4Q96G79 324 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 BBS4Q96RK4 519 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 KCNA7Q96RP8 456 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 EBPLQ9BY08 206 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 EPB41L4BQ9H329 900 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 GALNT9Q9HCQ5 603 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 TAS2R9Q9NYW1 312 aa18.56■□□□□ 0.56
PDLIM4-206ENST00000474421 DOCK7Q96N67 2140 aa18.55■□□□□ 0.56
PDLIM4-206ENST00000474421 ERN1O75460 977 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms