RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	SMPD2	O60906	423 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	PDE5A	O76074	875 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	SEMA4F	O95754	770 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	GOT2	P00505	430 aa	Known RBP	3.74	□□□□□ -1.81
BBX-223	ENST00000473542	AK1	P00568	194 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	KRT8	P05787	483 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	HOXB7	P09629	217 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	HSD17B1	P14061	328 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	CYP11B1	P15538	503 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	TNNI3	P19429	210 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	HTR2A	P28223	471 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	HPD	P32754	393 aa	Predicted RBP	3.74	□□□□□ -1.81
BBX-223	ENST00000473542	POLR2F	P61218	127 aa	Known RBP	3.74	□□□□□ -1.81
BBX-223	ENST00000473542	NOP14	P78316	857 aa	Known RBP	3.74	□□□□□ -1.81
BBX-223	ENST00000473542	SRY	Q05066	204 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	ZP4	Q12836	540 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	RAPSN	Q13702	412 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	ZKSCAN8	Q15776	578 aa	Predicted RBP	3.74	□□□□□ -1.81
BBX-223	ENST00000473542	ADPRM	Q3LIE5	342 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	DCAF4L1	Q3SXM0	396 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	DNAJC21	Q5F1R6	531 aa	Known RBP	3.74	□□□□□ -1.81
BBX-223	ENST00000473542	LDLRAP1	Q5SW96	308 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	DMKN	Q6E0U4	476 aa	Predicted RBP	3.74	□□□□□ -1.81
BBX-223	ENST00000473542	ARMCX5	Q6P1M9	558 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	ABRAXAS1	Q6UWZ7	409 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	ZNF562	Q6V9R5	426 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	MAPK1IP1L	Q8NDC0	245 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	NFAM1	Q8NET5	270 aa	Predicted RBP	3.74	□□□□□ -1.81
BBX-223	ENST00000473542	SNED1	Q8TER0	1413 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	LHX4	Q969G2	390 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	MCHR2	Q969V1	340 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	SYAP1	Q96A49	352 aa	Predicted RBP	3.74	□□□□□ -1.81
BBX-223	ENST00000473542	MRPL13	Q9BYD1	178 aa	Known RBP	3.74	□□□□□ -1.81
BBX-223	ENST00000473542	TRIM9	Q9C026	710 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	GFRA4	Q9GZZ7	299 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	TSPY26P	Q9H489	355 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	IL1RL2	Q9HB29	575 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	LPAR2	Q9HBW0	351 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	TRPV5	Q9NQA5	729 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	YAE1D1	Q9NRH1	226 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	CENPM	Q9NSP4	180 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	SLC35D1	Q9NTN3	355 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542	SENP1	Q9P0U3	644 aa		3.74	□□□□□ -1.81
BBX-223	ENST00000473542		A0A0J9YVX5	310 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542		A0A0U1RQV5	110 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542		A0A1B0GUL7	405 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	TEX48	A0A1B0GUV7	120 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	TYROBP	O43914	113 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	DIRAS3	O95661	229 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	GUCA1C	O95843	209 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	IGSF6	O95976	241 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	THRB	P10828	461 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	ADRA1A	P35348	466 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	MS4A2	Q01362	244 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	ZNF85	Q03923	595 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	CDKN3	Q16667	212 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	C17orf58	Q2M2W7	97 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	CYBRD1	Q53TN4	286 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	TMEM41B	Q5BJD5	291 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	ZNF506	Q5JVG8	444 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	NIPAL3	Q6P499	406 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	PAQR6	Q6TCH4	344 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	STXBP4	Q6ZWJ1	553 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	CBWD2	Q8IUF1	395 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	CCDC36	Q8IYA8	594 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	GCNT2	Q8N0V5	402 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	CENPS	Q8N2Z9	138 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	ZNF491	Q8N8L2	437 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	SELENOM	Q8WWX9	145 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	RBM18	Q96H35	190 aa	Known RBP	3.73	□□□□□ -1.81
BBX-223	ENST00000473542	VGLL1	Q99990	258 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	APOO	Q9BUR5	198 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	TRIM6	Q9C030	488 aa	Predicted RBP	3.73	□□□□□ -1.81
BBX-223	ENST00000473542	GHRL	Q9UBU3	117 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	ATP6V1H	Q9UI12	483 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	SH3BGRL2	Q9UJC5	107 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	KLK13	Q9UKR3	277 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	RNF6	Q9Y252	685 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	AP1M2	Q9Y6Q5	423 aa		3.73	□□□□□ -1.81
BBX-223	ENST00000473542	IGHV3OR16-12	A0A075B7B8	117 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	TTC26	A0AVF1	554 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	RPL37AP8	A6NKH3	93 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	WASH3P	C4AMC7	463 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	MCF2L	O15068	1137 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	RANBP6	O60518	1105 aa	Known RBP	3.72	□□□□□ -1.81
BBX-223	ENST00000473542	RAMP1	O60894	148 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	PEX11A	O75192	247 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	IDH1	O75874	414 aa	Known RBP	3.72	□□□□□ -1.81
BBX-223	ENST00000473542	MFN2	O95140	757 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	IFNB1	P01574	187 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	IGHV3-13	P01766	116 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	MT-ND1	P03886	318 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	IGFBP5	P24593	272 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	NAPA	P54920	295 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	MFAP2	P55001	183 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	TRA2B	P62995	288 aa	Known RBP	3.72	□□□□□ -1.81
BBX-223	ENST00000473542	ZNF311	Q5JNZ3	666 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	ZNF343	Q6P1L6	599 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	SLC39A4	Q6P5W5	647 aa		3.72	□□□□□ -1.81
BBX-223	ENST00000473542	RFWD3	Q6PCD5	774 aa		3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms