RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TBX19O60806 448 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 SLC2A2P11168 524 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-207ENST00000473212 SOX18P35713 384 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 GALK2Q01415 458 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 RAB40BQ12829 278 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 CLPPQ16740 277 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-207ENST00000473212 PPP2R2DQ66LE6 453 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 PLET1Q6UQ28 207 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 ZNF793Q6ZN11 406 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 NLGN4YQ8NFZ3 816 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-207ENST00000473212 KIAA1143Q96AT1 154 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-207ENST00000473212 LRIG1Q96JA1 1093 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 MENTQ9BUN1 341 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 RHBGQ9H310 441 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 RPRD1BQ9NQG5 326 aaKnown RBP19.87■□□□□ 0.77
COL18A1-207ENST00000473212 GSTK1Q9Y2Q3 226 aa19.87■□□□□ 0.77
COL18A1-207ENST00000473212 TMEM129A0AVI4 362 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 CASKO14936 926 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 PRODHO43272 600 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 HPGDSO60760 199 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 FKTNO75072 461 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 ALX3O95076 343 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 PCCBP05166 539 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 C8orf89P0DMQ9 161 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 PSKH1P11801 424 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 BUD31P41223 144 aaPredicted RBP19.86■□□□□ 0.77
COL18A1-207ENST00000473212 MLLT1Q03111 559 aaPredicted RBP19.86■□□□□ 0.77
COL18A1-207ENST00000473212 FUT5Q11128 374 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 TATDN3Q17R31 274 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 CNIH2Q6PI25 160 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 LHFPL3Q86UP9 236 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 Q8N402 240 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 NATD1Q8N6N6 113 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 TMEM163Q8TC26 289 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 ZG16BQ96DA0 208 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 FGF20Q9NP95 211 aaPredicted RBP19.86■□□□□ 0.77
COL18A1-207ENST00000473212 MARK1Q9P0L2 795 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 SLC9A8Q9Y2E8 581 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 SCN3AQ9NY46 2000 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 CHRM4P08173 479 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 KELP23276 732 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 MAP2K3P46734 347 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 P2RY14Q15391 338 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 FAM214AQ32MH5 1076 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 ENTPD8Q5MY95 495 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 TRIQKQ629K1 86 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 SLC36A4Q6YBV0 504 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 AMZ2Q86W34 360 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 YIPF7Q8N8F6 280 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 C19orf18Q8NEA5 215 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 TRIM43Q96BQ3 446 aaPredicted RBP19.86■□□□□ 0.77
COL18A1-207ENST00000473212 LINC00615Q96LM1 132 aaPredicted RBP19.86■□□□□ 0.77
COL18A1-207ENST00000473212 RIPOR3Q96MK2 946 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 DCLRE1CQ96SD1 692 aaKnown RBP19.86■□□□□ 0.77
COL18A1-207ENST00000473212 AIF1LQ9BQI0 150 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 DPH7Q9BTV6 452 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 SAP130Q9H0E3 1048 aa19.86■□□□□ 0.77
COL18A1-207ENST00000473212 ZCCHC3Q9NUD5 404 aaKnown RBP19.86■□□□□ 0.77
COL18A1-207ENST00000473212 FAM25AB3EWG3 89 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 FAM25CB3EWG5 89 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 FAM25GB3EWG6 89 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 KIAA0355O15063 1070 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 NDUFS4O43181 175 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 NCR1O76036 304 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 PRNPP04156 253 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 LIMS3P0CW19 117 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 LIMS4P0CW20 117 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 PPP2R1BP30154 601 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 GABRA5P31644 462 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 MTNR1AP48039 350 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 KIAA1211LQ6NV74 962 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 DCUN1D3Q8IWE4 304 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 C16orf58Q96GQ5 468 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 CLCA3PQ9Y6N3 262 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 IGKV1-8A0A0C4DH67 115 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 NOTOA8MTQ0 251 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 ERAL1O75616 437 aaKnown RBP19.85■□□□□ 0.77
COL18A1-207ENST00000473212 LALBAP00709 142 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 RB1P06400 928 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 CCNYL3P0C7X3 344 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 HLA-DMAP28067 261 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 PPP3R1P63098 170 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 ANKK1Q8NFD2 765 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 OR8D4Q8NGM9 314 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 TOX2Q96NM4 488 aa19.85■□□□□ 0.77
COL18A1-207ENST00000473212 MRPS18AQ9NVS2 196 aaKnown RBP19.85■□□□□ 0.77
COL18A1-207ENST00000473212 DNMT3AQ9Y6K1 912 aaPredicted RBP19.85■□□□□ 0.77
COL18A1-207ENST00000473212 C17orf113A0A1B0GUU1 675 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 GNRH1P01148 92 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 CPN2P22792 545 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 HTRA3P83110 453 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 EFR3AQ14156 821 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 LASP1Q14847 261 aaKnown RBP19.84■□□□□ 0.77
COL18A1-207ENST00000473212 CLEC12AQ5QGZ9 265 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 SYCE2Q6PIF2 218 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 NUDT13Q86X67 352 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 TEX47Q8TBZ9 253 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 JPH3Q8WXH2 748 aaPredicted RBP19.84■□□□□ 0.77
COL18A1-207ENST00000473212 PRRC1Q96M27 445 aa19.84■□□□□ 0.77
COL18A1-207ENST00000473212 ARHGAP9Q9BRR9 750 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms