RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 WDYHV1Q96HA8 205 aa13.96□□□□□ -0.17
VTI1A-203ENST00000472892 UGT2B28Q9BY64 529 aa13.96□□□□□ -0.17
VTI1A-203ENST00000472892 SIRT5Q9NXA8 310 aa13.96□□□□□ -0.17
VTI1A-203ENST00000472892 PSMC3IPQ9P2W1 217 aaPredicted RBP13.96□□□□□ -0.17
VTI1A-203ENST00000472892 ZNF629Q9UEG4 869 aaPredicted RBP13.96□□□□□ -0.17
VTI1A-203ENST00000472892 GNG14A0A1W2PPG7 69 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 CCDC151A5D8V7 595 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 FRG2CA6NGY1 282 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 KDM4EB2RXH2 506 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-203ENST00000472892 PCDH7O60245 1069 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 UGT2B11O75310 529 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 RHOXF2BP0C7M4 288 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 HTR6P50406 440 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 NAGLUP54802 743 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 HMGCS1Q01581 520 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 ACSM2AQ08AH3 577 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 PLCXD2Q0VAA5 305 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 MYBPHQ13203 477 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 HEPACAMQ14CZ8 416 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 TOMM20Q15388 145 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 WIPI1Q5MNZ9 446 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-203ENST00000472892 NSUN5P2Q63ZY6 315 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 ACSM2BQ68CK6 577 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 SPNS3Q6ZMD2 512 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 FAM83FQ8NEG4 500 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-203ENST00000472892 C16orf78Q8WTQ4 265 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 ABTB1Q969K4 478 aaPredicted RBP13.95□□□□□ -0.18
VTI1A-203ENST00000472892 BTBD9Q96Q07 612 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 KCNA7Q96RP8 456 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 OSBPL11Q9BXB4 747 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 GSTO2Q9H4Y5 243 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 EXO1Q9UQ84 846 aaKnown RBP13.95□□□□□ -0.18
VTI1A-203ENST00000472892 TIMM22Q9Y584 194 aa13.95□□□□□ -0.18
VTI1A-203ENST00000472892 CELSR1Q9NYQ6 3014 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 OR6C70A6NIJ9 312 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 CD8B2A6NJW9 211 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 G3V2L1 256 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 UBFD1O14562 309 aaKnown RBP13.94□□□□□ -0.18
VTI1A-203ENST00000472892 DVL2O14641 736 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 CBR3O75828 277 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 ACTL6AO96019 429 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 CT45A8P0DMV1 189 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 CT45A9P0DMV2 189 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 TIA1P31483 386 aaKnown RBP eCLIP13.94□□□□□ -0.18
VTI1A-203ENST00000472892 PEX19P40855 299 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 GSTM5P46439 218 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 WNT3P56703 355 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 FBXL19-AS1Q494R0 122 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 CT45A2Q5DJT8 189 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 DCST1Q5T197 706 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 SH2D5Q6ZV89 423 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 YRDCQ86U90 279 aaKnown RBP13.94□□□□□ -0.18
VTI1A-203ENST00000472892 TMEM200AQ86VY9 491 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 WDSUB1Q8N9V3 476 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 RELL2Q8NC24 303 aaPredicted RBP13.94□□□□□ -0.18
VTI1A-203ENST00000472892 OR9A2Q8NGT5 310 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 TMBIM1Q969X1 311 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 EXOSC8Q96B26 276 aaKnown RBP13.94□□□□□ -0.18
VTI1A-203ENST00000472892 TMCO6Q96DC7 493 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 CCDC126Q96EE4 140 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 SLC35A4Q96G79 324 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 COL21A1Q96P44 957 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 ANKRA2Q9H9E1 313 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 CALHM2Q9HA72 323 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 GALNT9Q9HCQ5 603 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 PFDN4Q9NQP4 134 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 SLC35C2Q9NQQ7 365 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 EHD3Q9NZN3 535 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 TBK1Q9UHD2 729 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 EMCNQ9ULC0 261 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 CAMK2AQ9UQM7 478 aa13.94□□□□□ -0.18
VTI1A-203ENST00000472892 FREM3P0C091 2139 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 F8P00451 2351 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 A0A1W2PPM1 405 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 PRAMEF25A6NGN4 478 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 PLOD3O60568 738 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 CTAG2O75638 210 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 ZWINTO95229 277 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 IL2RAP01589 272 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 ANXA4P09525 319 aaPredicted RBP13.93□□□□□ -0.18
VTI1A-203ENST00000472892 CPN1P15169 458 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 BMP5P22003 454 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 MPIP34949 423 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 ZNF136P52737 540 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 FOXA1P55317 472 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 NAA20P61599 178 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 PSPHP78330 225 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 BTKQ06187 659 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.93□□□□□ -0.18
VTI1A-203ENST00000472892 ZPLD1Q8TCW7 415 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 KAT2AQ92830 837 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 VSTM2LQ96N03 204 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 SH3GL2Q99962 352 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 RHOXF2Q9BQY4 288 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 SHCBP1LQ9BZQ2 653 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 MID1IP1Q9NPA3 183 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 GIMAP4Q9NUV9 329 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 KLRF1Q9NZS2 232 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 HIVEP1P15822 2718 aa13.93□□□□□ -0.18
VTI1A-203ENST00000472892 ANKRD17O75179 2603 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms