RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 RAB21Q9UL25 225 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 A0A1B0GVC2 190 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 FIGNL2A6NMB9 653 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 FMO6PO60774 539 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 ANXA8P13928 327 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 VAMP1P23763 118 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 PCBD1P61457 104 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 PPIAP62937 165 aaKnown RBP8.14□□□□□ -1.11
CD47-204ENST00000471694 MFSD13AQ14CX5 517 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 CCDC36Q8IYA8 594 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 OR5K1Q8NHB7 308 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 OR14A16Q8NHC5 309 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 SLC25A44Q96H78 314 aaPredicted RBP8.14□□□□□ -1.11
CD47-204ENST00000471694 LIPT1Q9Y234 373 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 LCHNA4D1U4 455 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 BLACEA4D250 179 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 AMY2BP19961 511 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 HTR3AP46098 478 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 TPMTP51580 245 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 EMP3P54852 163 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 CARD18P57730 90 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 INCA1Q0VD86 236 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 PTP4A2Q12974 167 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 MSS51Q4VC12 460 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 CLEC17AQ6ZS10 378 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 KCTD9Q7L273 389 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 MARCH9Q86YJ5 346 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 CPXM2Q8N436 756 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 OR52R1Q8NGF1 315 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 NPRL2Q8WTW4 380 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 TNFRSF25Q93038 417 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 DTD2Q96FN9 168 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 NTMT1Q9BV86 223 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 TMEM109Q9BVC6 243 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 ATG5Q9H1Y0 275 aa8.14□□□□□ -1.11
CD47-204ENST00000471694 NOP16Q9Y3C1 178 aaKnown RBP8.14□□□□□ -1.11
CD47-204ENST00000471694 TCRBV7S2A1N4TA0A589 114 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 FAM149AA5PLN7 773 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 ABLIM1O14639 778 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 KIAA0513O60268 411 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 GFRA3O60609 400 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 KRT36O76013 467 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 CLEC3BP05452 202 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 TPTEP56180 551 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 CDKL4Q5MAI5 379 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 C10orf62Q5T681 223 aaPredicted RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 GRHL2Q6ISB3 625 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 MMP21Q8N119 569 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 S100ZQ8WXG8 99 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 KCNN1Q92952 543 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 MAPKAP1Q9BPZ7 522 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 POLR2J2Q9GZM3 115 aaKnown RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 KATNBL1Q9H079 304 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 TPT1P8Q9HAU6 139 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 CD93Q9NPY3 652 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 PRSS16Q9NQE7 514 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 TNFRSF19Q9NS68 423 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 NOCTQ9UK39 431 aaKnown RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 SARDHQ9UL12 918 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 PROCRQ9UNN8 238 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 A8MT66 165 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 HAX1O00165 279 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 NUDT21O43809 227 aaKnown RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 TIA1P31483 386 aaKnown RBP eCLIP8.13□□□□□ -1.112e-6■■■■□ 24.8
CD47-204ENST00000471694 ZNF81P51508 661 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 AP2S1P53680 142 aaPredicted RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 TRIP6Q15654 476 aaKnown RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 FAM182AQ5T1J6 154 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 SYT14Q8NB59 555 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 AKTIPQ9H8T0 292 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 NALCNQ8IZF0 1738 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 COL3A1P02461 1466 aaPredicted RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 FAM230AA0A1W2PPH8 454 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 FLRT2O43155 660 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 ATP6V1G2O95670 118 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 GPIP06744 558 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 UNGP13051 313 aaPredicted RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 AFF1P51825 1210 aaKnown RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 CTXN1P60606 82 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 PLEKHG7Q6ZR37 379 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 OR13H1Q8NG92 308 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 PIGQQ9BRB3 760 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 CD248Q9HCU0 757 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 LTB4R2Q9NPC1 389 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 PNPLA3Q9NST1 481 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 MYEF2Q9P2K5 600 aaKnown RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 KLHL42Q9P2K6 505 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 COMMD3Q9UBI1 195 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 BORCS7-ASMTA0A0B4J1R7 106 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 OR2AT4A6NND4 320 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 CLCA1A8K7I4 914 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 ZNF749O43361 778 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 ENTPD6O75354 484 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 CRYABP02511 175 aaKnown RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 MAGP20916 626 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 PTAFRP25105 342 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 TMBIM6P55061 237 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 SCGB2A2Q13296 93 aa8.13□□□□□ -1.11
CD47-204ENST00000471694 EIF2S3LQ2VIR3 472 aaKnown RBP8.13□□□□□ -1.11
CD47-204ENST00000471694 MANEALQ5VSG8 457 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms