RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 DNHD1Q96M86 4753 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 HRNRQ86YZ3 2850 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-211ENST00000471455 LOC100996750A0A140TA64 210 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 A0A1W2PR48 441 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 GLOD5A6NK44 160 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 KDM4EB2RXH2 506 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-211ENST00000471455 PRKRAO75569 313 aaKnown RBP8.3□□□□□ -1.08
CPSF4-211ENST00000471455 PPM1BO75688 479 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 CBR3O75828 277 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 CRHP06850 196 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 LTA4HP09960 611 aaKnown RBP8.3□□□□□ -1.08
CPSF4-211ENST00000471455 GFAPP14136 432 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 NT5EP21589 574 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 ABCD3P28288 659 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 CPOXP36551 454 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 ARL1P40616 181 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-211ENST00000471455 NAGLUP54802 743 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 RAC1P63000 192 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 PSPHP78330 225 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 PLCXD2Q0VAA5 305 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 FGFBP1Q14512 234 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 GRTP1Q5TC63 336 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 FNDC7Q5VTL7 733 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 BICRALQ6AI39 1079 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 OR2A2Q6IF42 318 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 MRM1Q6IN84 353 aaKnown RBP8.3□□□□□ -1.08
CPSF4-211ENST00000471455 METTL2BQ6P1Q9 378 aaKnown RBP8.3□□□□□ -1.08
CPSF4-211ENST00000471455 TMEM64Q6YI46 380 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 CYS1Q717R9 158 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 CHMP1BQ7LBR1 199 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 PAGE2Q7Z2X7 111 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 NUP54Q7Z3B4 507 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 IFNEQ86WN2 208 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 CXorf67Q86X51 503 aaPredicted RBP8.3□□□□□ -1.08
CPSF4-211ENST00000471455 GRAMD2AQ8IUY3 354 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 CTAGE3PQ8IX95 158 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 TEX9Q8N6V9 391 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 RHEBL1Q8TAI7 183 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 ARSGQ96EG1 525 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 SERPINI1Q99574 410 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 CCL19Q99731 98 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 SMR3AQ99954 134 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 KRTAP4-6Q9BYQ5 205 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 TRIM31Q9BZY9 425 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 OR2B2Q9GZK3 357 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 RASSF4Q9H2L5 321 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 AHSPQ9NZD4 102 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 EGFL7Q9UHF1 273 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 TESMINQ9Y4I5 508 aa8.3□□□□□ -1.08
CPSF4-211ENST00000471455 TNPO3Q9Y5L0 923 aaKnown RBP8.3□□□□□ -1.08
CPSF4-211ENST00000471455 A0A087X1B8 175 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 TCRBV9S1A1TA0A576 114 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 PRAMEF25A6NGN4 478 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 H7C1Q1 480 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 UBXN8O00124 270 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 FOXE1O00358 373 aaPredicted RBP8.29□□□□□ -1.08
CPSF4-211ENST00000471455 TMPRSS11DO60235 418 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 ICMTO60725 284 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 EEDO75530 441 aaKnown RBP8.29□□□□□ -1.08
CPSF4-211ENST00000471455 GHRHP01286 108 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 CLPSP04118 112 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 ABCB1P08183 1280 aaPredicted RBP8.29□□□□□ -1.08
CPSF4-211ENST00000471455 CPMP14384 443 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 GPX3P22352 226 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 STX2P32856 288 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 BSGP35613 385 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 DEKP35659 375 aaKnown RBP8.29□□□□□ -1.08
CPSF4-211ENST00000471455 PAFAH1B1P43034 410 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 GATA4P43694 442 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 XKP51811 444 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 ALDH18A1P54886 795 aaKnown RBP8.29□□□□□ -1.08
CPSF4-211ENST00000471455 SRYQ05066 204 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 NAB1Q13506 487 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 CPSF6Q16630 551 aaKnown RBP eCLIP8.29□□□□□ -1.08
CPSF4-211ENST00000471455 FAM83EQ2M2I3 478 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 DCST1Q5T197 706 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 KLC3Q6P597 504 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 P4HA3Q7Z4N8 544 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 ISCA2Q86U28 154 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 YRDCQ86U90 279 aaKnown RBP8.29□□□□□ -1.08
CPSF4-211ENST00000471455 KRTAP1-3Q8IUG1 177 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 PRR22Q8IZ63 422 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 ZNF615Q8N8J6 731 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 LRRN4CLQ8ND94 238 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 DOK4Q8TEW6 326 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 ADIPOR1Q96A54 375 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 INTS12Q96CB8 462 aaKnown RBP8.29□□□□□ -1.08
CPSF4-211ENST00000471455 TMCO6Q96DC7 493 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 SFXN2Q96NB2 322 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 ATOH8Q96SQ7 321 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 TUBA1CQ9BQE3 449 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 SLC39A3Q9BRY0 314 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 ZNF717Q9BY31 904 aaPredicted RBP8.29□□□□□ -1.08
CPSF4-211ENST00000471455 SAYSD1Q9NPB0 183 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 TPSG1Q9NRR2 321 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 PRODH2Q9UF12 536 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 ADAM29Q9UKF5 820 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 PSME2Q9UL46 239 aa8.29□□□□□ -1.08
CPSF4-211ENST00000471455 EXO1Q9UQ84 846 aaKnown RBP8.29□□□□□ -1.08
CPSF4-211ENST00000471455 DLGAP4Q9Y2H0 992 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms