RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 C8orf89P0DMQ9 161 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 NR2F6P10588 404 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 COX7A2P14406 83 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ZNF10P21506 573 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-208ENST00000470268 CALB2P22676 271 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 CPN2P22792 545 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 SLC5A2P31639 672 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ASMTP46597 345 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 AVPR1BP47901 424 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ALDH9A1P49189 494 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 POLR2JP52435 117 aaKnown RBP4.42□□□□□ -1.7
SF3B1-208ENST00000470268 RAB38P57729 211 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 STX1BP61266 288 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 TRA2BP62995 288 aaKnown RBP4.42□□□□□ -1.7
SF3B1-208ENST00000470268 DCDP81605 110 aaKnown RBP4.42□□□□□ -1.7
SF3B1-208ENST00000470268 SRSF3P84103 164 aaKnown RBP4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ID2Q02363 134 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 KPNB1Q14974 876 aaKnown RBP4.42□□□□□ -1.7
SF3B1-208ENST00000470268 HEPACAMQ14CZ8 416 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 RPS6KA2Q15349 733 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 VPS26BQ4G0F5 336 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 NKAIN1Q4KMZ8 207 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 TIGD2Q4W5G0 525 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 PAGE3Q5JUK9 113 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ARHGAP40Q5TG30 622 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 OR4F3Q6IEY1 312 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 SLC48A1Q6P1K1 146 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 FAM198BQ6UWH4 519 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 SHISA6Q6ZSJ9 500 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ESPNLQ6ZVH7 1005 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 IKBIPQ70UQ0 350 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 CAMKMTQ7Z624 323 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ZNF605Q86T29 641 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ANKRD46Q86W74 232 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 SNX32Q86XE0 403 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 PRSS58Q8IYP2 241 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 GALNT15Q8N3T1 639 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 RNF148Q8N7C7 305 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 HIPK4Q8NE63 616 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 C1orf162Q8NEQ5 155 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-208ENST00000470268 SUN3Q8TAQ9 357 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 STT3BQ8TCJ2 826 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ANKRD9Q96BM1 317 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-208ENST00000470268 TESCQ96BS2 214 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 MIEF2Q96C03 454 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 COQ8BQ96D53 544 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 FAM122AQ96E09 287 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 SPDL1Q96EA4 605 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ZNF681Q96N22 645 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 LRFN5Q96NI6 719 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 THTPAQ9BU02 230 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 SLC7A5P2Q9GIP4 190 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ROGDIQ9GZN7 287 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 CHST8Q9H2A9 424 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 MS4A5Q9H3V2 200 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 RPF2Q9H7B2 306 aaKnown RBP4.42□□□□□ -1.7
SF3B1-208ENST00000470268 POLR1BQ9H9Y6 1135 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ASCL3Q9NQ33 180 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 SLC6A13Q9NSD5 602 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 LYARQ9NX58 379 aaKnown RBP4.42□□□□□ -1.7
SF3B1-208ENST00000470268 SH3BP4Q9P0V3 963 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 TRPC4Q9UBN4 977 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ATP6V1HQ9UI12 483 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 TAGLN3Q9UI15 199 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 KLK13Q9UKR3 277 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 NEUROG3Q9Y4Z2 214 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 PCDHGA8Q9Y5G5 932 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 ZFHX4Q86UP3 3567 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 KIF26BQ2KJY2 2108 aa4.42□□□□□ -1.7
SF3B1-208ENST00000470268 FAM234BA2RU67 622 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 VSTM2BA6NLU5 285 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 AIM2O14862 343 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 NVLO15381 856 aaKnown RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 TBX19O60806 448 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 B4GALT2O60909 372 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 ERAL1O75616 437 aaKnown RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 KLF7O75840 302 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 KRT36O76013 467 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 MPIG6BO95866 241 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 FHP07954 510 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 COX4I1P13073 169 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 RNH1P13489 461 aaKnown RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 MAOAP21397 527 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 FBLP22087 321 aaKnown RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 F8A1P23610 371 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 PPP2R1BP30154 601 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 ADSLP30566 484 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 PGM1P36871 562 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 FEN1P39748 380 aaKnown RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 STAT5AP42229 794 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 FRKP42685 505 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 SCAND1P57086 179 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 MXRA7P84157 204 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 PLIN5Q00G26 463 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 ALDH6A1Q02252 535 aaKnown RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 FOLH1Q04609 750 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 PIN1Q13526 163 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 CEBPEQ15744 281 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 SNCBQ16143 134 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 PGS1Q32NB8 556 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms