RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 NSDHLQ15738 373 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 FCRLBQ6BAA4 426 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 ADNP2Q6IQ32 1131 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 HUS1BQ8NHY5 278 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 PRR7Q8TB68 274 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 TBC1D20Q96BZ9 403 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 OR1F2PQ96R84 312 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 MYCBPQ99417 103 aaPredicted RBP16.42■□□□□ 0.22
MRPL28-208ENST00000469744 FAM192AQ9GZU8 254 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 OLAHQ9NV23 265 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 C19orf25Q9UFG5 118 aaPredicted RBP16.42■□□□□ 0.22
MRPL28-208ENST00000469744 ADGRE2Q9UHX3 823 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 ICE1Q9Y2F5 2266 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 MAST4O15021 2626 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 C7orf72A4D263 438 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 MAGEB17A8MXT2 336 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 AGFG2O95081 481 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 LDLRP01130 860 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 RAP2AP10114 183 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 PGS1Q32NB8 556 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 FAM98BQ52LJ0 330 aaKnown RBP16.42■□□□□ 0.22
MRPL28-208ENST00000469744 FHL5Q5TD97 284 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 TMIGD1Q6UXZ0 262 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 OR1N1Q8NGS0 311 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 OR10A6Q8NH74 314 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 GRHL3Q8TE85 626 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 REXO5Q96IC2 774 aaKnown RBP16.42■□□□□ 0.22
MRPL28-208ENST00000469744 MTERF1Q99551 399 aaKnown RBP16.42■□□□□ 0.22
MRPL28-208ENST00000469744 PRPF18Q99633 342 aaKnown RBP16.42■□□□□ 0.22
MRPL28-208ENST00000469744 SLC29A1Q99808 456 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 BDH2Q9BUT1 245 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 ZNF639Q9UID6 485 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 BTNL2Q9UIR0 455 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 USP22Q9UPT9 525 aa16.42■□□□□ 0.22
MRPL28-208ENST00000469744 BLACEA4D250 179 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 EVPLLA8MZ36 301 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 FAM227AF5H4B4 570 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 RFXANKO14593 260 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 SCN2BO60939 215 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 PRSS23O95084 383 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 RASAL1O95294 804 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 WDPCPO95876 746 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 CYC1P08574 325 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 ZCCHC18P0CG32 403 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 RNF224P0DH78 156 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 PCNAP12004 261 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 ICAM2P13598 275 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 TIA1P31483 386 aaKnown RBP eCLIP16.41■□□□□ 0.22
MRPL28-208ENST00000469744 RPL3P39023 403 aaKnown RBP16.41■□□□□ 0.22
MRPL28-208ENST00000469744 TSFMP43897 325 aaKnown RBP16.41■□□□□ 0.22
MRPL28-208ENST00000469744 WNT3P56703 355 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 SKP1P63208 163 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 RAE1P78406 368 aaKnown RBP16.41■□□□□ 0.22
MRPL28-208ENST00000469744 BTN3A2P78410 334 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 BTG2P78543 158 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 CHRNB3Q05901 458 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 ANXA8L1Q5VT79 327 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 PLAG1Q6DJT9 500 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 PAPD4Q6PIY7 484 aaKnown RBP16.41■□□□□ 0.22
MRPL28-208ENST00000469744 SERPINA11Q86U17 422 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 CHERPQ8IWX8 916 aaKnown RBP16.41■□□□□ 0.22
MRPL28-208ENST00000469744 COQ8BQ96D53 544 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 FAM120BQ96EK7 910 aaKnown RBP16.41■□□□□ 0.22
MRPL28-208ENST00000469744 PHF12Q96QT6 1004 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 CIB1Q99828 191 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 CHID1Q9BWS9 393 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 SPATA9Q9BWV2 254 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 PITHD1Q9GZP4 211 aaPredicted RBP16.41■□□□□ 0.22
MRPL28-208ENST00000469744 MAGIXQ9H6Y5 334 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 ZNF696Q9H7X3 374 aa16.41■□□□□ 0.22
MRPL28-208ENST00000469744 ZGRF1Q86YA3 2104 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 URADA6NGE7 173 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 CXCR6O00574 342 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 SCAMP2O15127 329 aaKnown RBP16.4■□□□□ 0.22
MRPL28-208ENST00000469744 DEAF1O75398 565 aaPredicted RBP16.4■□□□□ 0.22
MRPL28-208ENST00000469744 FAM58BPP0C7Q3 252 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 SMIM10L1P0DMW3 83 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 MAOAP21397 527 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 PPIBP23284 216 aaKnown RBP16.4■□□□□ 0.22
MRPL28-208ENST00000469744 SERPINB1P30740 379 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 HPCAL1P37235 193 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 RPS13P62277 151 aaKnown RBP16.4■□□□□ 0.22
MRPL28-208ENST00000469744 PLIN5Q00G26 463 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 DDX39BQ13838 428 aaKnown RBP16.4■□□□□ 0.22
MRPL28-208ENST00000469744 C6orf52Q5T4I8 152 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 ABHD17BQ5VST6 288 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 OR4F3Q6IEY1 312 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 VN1R5Q7Z5H4 357 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 KRT78Q8N1N4 520 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 RNF175Q8N4F7 328 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 C1orf52Q8N6N3 182 aaKnown RBP16.4■□□□□ 0.22
MRPL28-208ENST00000469744 PLPP5Q8NEB5 264 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 SMIM10Q96HG1 83 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 EGLN2Q96KS0 407 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 BARD1Q99728 777 aaKnown RBP16.4■□□□□ 0.22
MRPL28-208ENST00000469744 REXO4Q9GZR2 422 aaKnown RBP16.4■□□□□ 0.22
MRPL28-208ENST00000469744 IKZF5Q9H5V7 419 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 NT5DC2Q9H857 520 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 DMRT3Q9NQL9 472 aa16.4■□□□□ 0.22
MRPL28-208ENST00000469744 ATP6V1HQ9UI12 483 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms