RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 DZANK1Q9NVP4 752 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 CNIH4Q9P003 139 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 ZNF229Q9UJW7 825 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 CARD8Q9Y2G2 431 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 GPR52Q9Y2T5 361 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 RPL36Q9Y3U8 105 aaKnown RBP13.78□□□□□ -0.2
CBWD3-205ENST00000469687 A3GALT2U3KPV4 340 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 A0A0G2JPF8 293 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 HNRNPCL2B2RXH8 293 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 HNRNPCL3B7ZW38 293 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 TAF4O00268 1085 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 CTDSP2O14595 271 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 EMC8O43402 210 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 ZNF888P0CJ79 500 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-205ENST00000469687 HNRNPCL4P0DMR1 293 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 PTNP21246 168 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 NTSR1P30989 418 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 S100A5P33763 92 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 TGM4P49221 684 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 TAS2R41P59536 307 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 PRR5P85299 388 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 ALDH6A1Q02252 535 aaKnown RBP13.78□□□□□ -0.2
CBWD3-205ENST00000469687 NCF4Q15080 339 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 SHHQ15465 462 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 C6orf132Q5T0Z8 1188 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 MEDAGQ5VYS4 303 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 ANKRD54Q6NXT1 300 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 BHLHB9Q6PI77 547 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 PRICKLE2Q7Z3G6 844 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 PAQR7Q86WK9 346 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 IL17RCQ8NAC3 791 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 MINDY2Q8NBR6 621 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 OR56A1Q8NGH5 318 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 OR52I1Q8NGK6 324 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 OR8D4Q8NGM9 314 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 FGF11Q92914 225 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 COL26A1Q96A83 441 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 FAM131CQ96AQ9 280 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 SCARF2Q96GP6 870 aaPredicted RBP13.78□□□□□ -0.2
CBWD3-205ENST00000469687 TRNT1Q96Q11 434 aaKnown RBP13.78□□□□□ -0.2
CBWD3-205ENST00000469687 SPATA5L1Q9BVQ7 753 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 PINK1Q9BXM7 581 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 KLHL25Q9H0H3 589 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 SACM1LQ9NTJ5 587 aa13.78□□□□□ -0.2
CBWD3-205ENST00000469687 MYO15AQ9UKN7 3530 aa13.77□□□□□ -0.2
CBWD3-205ENST00000469687 LRRTM2O43300 516 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 MPIP34949 423 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 RPS19P39019 145 aaKnown RBP13.77□□□□□ -0.21
CBWD3-205ENST00000469687 AVPR1BP47901 424 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 PDX1P52945 283 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 CDK5Q00535 292 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 TFF2Q03403 129 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 OCLNQ16625 522 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 FLYWCH1Q4VC44 716 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 AGAP7PQ5VUJ5 663 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 CD300LDQ6UXZ3 194 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 OR4N5Q8IXE1 308 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 NANOGP1Q8N7R0 232 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 OR7G2Q8NG99 324 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 ZCCHC10Q8TBK6 192 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 C10orf90Q96M02 699 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 ZNF582Q96NG8 517 aaPredicted RBP13.77□□□□□ -0.21
CBWD3-205ENST00000469687 POLDIP3Q9BY77 421 aaKnown RBP13.77□□□□□ -0.21
CBWD3-205ENST00000469687 BARHL1Q9BZE3 327 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 POLR2J2Q9GZM3 115 aaKnown RBP13.77□□□□□ -0.21
CBWD3-205ENST00000469687 KLF15Q9UIH9 416 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 VCANP13611 3396 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 KNL1Q8NG31 2342 aa13.77□□□□□ -0.21
CBWD3-205ENST00000469687 CASC3O15234 703 aaKnown RBP13.76□□□□□ -0.21
CBWD3-205ENST00000469687 P2RX6O15547 441 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 GUCY1B2O75343 617 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 EGFP01133 1207 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 ALOX5P09917 674 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 HOXB2P14652 356 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 SPNP16150 400 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 ETV5P41161 510 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 CRYBB2P43320 205 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 ETV1P50549 477 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 STXBP1P61764 594 aaKnown RBP13.76□□□□□ -0.21
CBWD3-205ENST00000469687 EFNB1P98172 346 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 PRKCDQ05655 676 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 COX10Q12887 443 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 CEBPEQ15744 281 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 SNAPC1Q16533 368 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 LIPKQ5VXJ0 399 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 FAM26EQ8N5C1 309 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 POC5Q8NA72 575 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 SLC16A11Q8NCK7 471 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 FAM46AQ96IP4 442 aaKnown RBP13.76□□□□□ -0.21
CBWD3-205ENST00000469687 MND1Q9BWT6 205 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 ASPNQ9BXN1 380 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 MKLN1Q9UL63 735 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 ZNF780BQ9Y6R6 833 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 COLEC10Q9Y6Z7 277 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 PNMA8CA0A1B0GUJ8 204 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 CYP7B1O75881 506 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 ALPPP05187 535 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 NR2F6P10588 404 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 ALOX12P18054 663 aa13.76□□□□□ -0.21
CBWD3-205ENST00000469687 GAS1P54826 345 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms