RNA–Protein interactions for RNA: ENST00000466519.5

SEC22A-202, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22A, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-202ENST00000466519 KLHDC8AQ8IYD2 350 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 PM20D2Q8IYS1 436 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 GPATCH11Q8N954 259 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 SLC2A12Q8TD20 617 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 BCAS4Q8TDM0 211 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 ATL1Q8WXF7 558 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 FBXL8Q96CD0 374 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 MS4A6EQ96DS6 147 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 LINGO1Q96FE5 620 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 PERPQ96FX8 193 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 TRIB1Q96RU8 372 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 CSF3RQ99062 836 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 NDNQ99608 321 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 WDR83Q9BRX9 315 aaKnown RBP5.53□□□□□ -1.52
SEC22A-202ENST00000466519 RBM24Q9BX46 236 aaKnown RBP5.53□□□□□ -1.52
SEC22A-202ENST00000466519 TRIM54Q9BYV2 358 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 RAB17Q9H0T7 212 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 PELI2Q9HAT8 420 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 PROK2Q9HC23 129 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 SMURF1Q9HCE7 757 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 HOMER3Q9NSC5 361 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 C20orf96Q9NUD7 363 aaPredicted RBP5.53□□□□□ -1.52
SEC22A-202ENST00000466519 TAS2R13Q9NYV9 303 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 CNIH4Q9P003 139 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 COPS7AQ9UBW8 275 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 NDRG3Q9UGV2 375 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 FBXO5Q9UKT4 447 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 CNOT11Q9UKZ1 510 aaKnown RBP5.53□□□□□ -1.52
SEC22A-202ENST00000466519 CAMK2AQ9UQM7 478 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 KCNE2Q9Y6J6 123 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 CACNA1CQ13936 2221 aa5.53□□□□□ -1.52
SEC22A-202ENST00000466519 NSD1Q96L73 2696 aaPredicted RBP5.53□□□□□ -1.52
SEC22A-202ENST00000466519 A0A088AWK7 358 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 MBD3L3A6NE82 208 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 SDR42E2A6NKP2 422 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 H2AFYO75367 372 aaKnown RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 ERN1O75460 977 aaKnown RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 ETHE1O95571 254 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 ACSL3O95573 720 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 CNOT4O95628 575 aaKnown RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 CELA3BP08861 270 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 MYZAPP0CAP1 466 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 FPR1P21462 350 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 ZNF10P21506 573 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 GDF1P27539 372 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 HNRNPH1P31943 449 aaKnown RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 KCNJ1P48048 391 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 CPA2P48052 419 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 GTF2A1P52655 376 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 MTTPP55157 894 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 CDKN2DP55273 166 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 LIM2P55344 173 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 IL2P60568 153 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 SARNPP82979 210 aaKnown RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 FOXF2Q12947 444 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 SERTAD2Q14140 314 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 RCN2Q14257 317 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 SLMAPQ14BN4 828 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 HSP90AA5PQ58FG0 334 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 HMBOX1Q6NT76 420 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 DRICH1Q6PGQ1 229 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 TMPRSS11BQ86T26 416 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 CAND1Q86VP6 1230 aaKnown RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 C9orf40Q8IXQ3 194 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 KLHL36Q8N4N3 616 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 SLC15A4Q8N697 577 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 C9orf106Q8NAJ2 232 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 NOA1Q8NC60 698 aaKnown RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 OR10G3Q8NGC4 313 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 MBD3L2Q8NHZ7 208 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 GABPB2Q8TAK5 448 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 NUBPLQ8TB37 319 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 SLC22A8Q8TCC7 542 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 CALML6Q8TD86 181 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 ZNF721Q8TF20 911 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 CCT6BQ92526 530 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 SPACA9Q96E40 222 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 WDYHV1Q96HA8 205 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 SENP5Q96HI0 755 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 QRFPRQ96P65 431 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 SERINC2Q96SA4 455 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 SECISBP2Q96T21 854 aaKnown RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 CCL19Q99731 98 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 DOHHQ9BU89 302 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 REXO4Q9GZR2 422 aaKnown RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 NSRP1Q9H0G5 558 aaKnown RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 CALHM2Q9HA72 323 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 BARX1Q9HBU1 254 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 GALNT8Q9NY28 637 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 C6orf203Q9P0P8 240 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 DAPP1Q9UN19 280 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 SLC22A14Q9Y267 594 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 SLC6A5Q9Y345 797 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 CHCHD2Q9Y6H1 151 aaPredicted RBP5.52□□□□□ -1.53
SEC22A-202ENST00000466519 STAB1Q9NY15 2570 aa5.52□□□□□ -1.53
SEC22A-202ENST00000466519 HRNRQ86YZ3 2850 aaPredicted RBP5.51□□□□□ -1.53
SEC22A-202ENST00000466519 PRAMEF25A6NGN4 478 aa5.51□□□□□ -1.53
SEC22A-202ENST00000466519 KRTAP9-7A8MTY7 169 aa5.51□□□□□ -1.53
SEC22A-202ENST00000466519 DEFB108AA8MXU0 73 aa5.51□□□□□ -1.53
SEC22A-202ENST00000466519 PGRMC1O00264 195 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms