RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 HIST1H1TP22492 207 aaPredicted RBP18.2■□□□□ 0.5
LIMS2-212ENST00000466410 WNT4P56705 351 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 COPZ1P61923 177 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 RPS25P62851 125 aaKnown RBP18.2■□□□□ 0.5
LIMS2-212ENST00000466410 BNC1Q01954 994 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 MLLT1Q03111 559 aaPredicted RBP18.2■□□□□ 0.5
LIMS2-212ENST00000466410 TAB1Q15750 504 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 TMEM35AQ53FP2 167 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 KLHL22Q53GT1 634 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 C3orf38Q5JPI3 329 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 TMEM64Q6YI46 380 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 SHFQ7M4L6 423 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 PRICKLE2Q7Z3G6 844 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 LAPTM4BQ86VI4 370 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 RAB42Q8N4Z0 105 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 OR6F1Q8NGZ6 308 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 TMEM163Q8TC26 289 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 CAPSLQ8WWF8 208 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 WDR26Q9H7D7 661 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 SLC6A20Q9NP91 592 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 EQTNQ9NQ60 294 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 CNIH4Q9P003 139 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 PCDHGB2Q9Y5G2 931 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 A0A0G2JPF8 293 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 OR52A4PA6NMU1 304 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 HNRNPCL2B2RXH8 293 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 HNRNPCL3B7ZW38 293 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 AIFM1O95831 613 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 HNRNPCL4P0DMR1 293 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 AGBL4Q5VU57 503 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 ABHD17CQ6PCB6 329 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 SYT14Q8NB59 555 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 ASB16Q96NS5 453 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 PINK1Q9BXM7 581 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 SYNPO2LQ9H987 977 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 MARCH7Q9H992 704 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 SERGEFQ9UGK8 458 aa18.2■□□□□ 0.5
LIMS2-212ENST00000466410 RFXAPO00287 272 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 PRODHO43272 600 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 PAK4O96013 591 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 ACP2P11117 423 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 GSTM3P21266 225 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 SDC2P34741 201 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 TAS2R41P59536 307 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 IRF4Q15306 451 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 MRM1Q6IN84 353 aaKnown RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 SLC27A4Q6P1M0 643 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 VRK2Q86Y07 508 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 TTLQ8NG68 377 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 TEX47Q8TBZ9 253 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 C1GALT1C1Q96EU7 318 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 TM9SF2Q99805 663 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 MRPS30Q9NP92 439 aaKnown RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 A0A1W2PQL4 384 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 CASC3O15234 703 aaKnown RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 EIF2S1P05198 315 aaKnown RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 NR2F6P10588 404 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 ATP5A1P25705 553 aaKnown RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 CERS1P27544 350 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 CHRNEQ04844 493 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 UBE3AQ05086 875 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 GLYR1Q49A26 553 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 CLEC12AQ5QGZ9 265 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 ZNF544Q6NX49 715 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 FAM131AQ6UXB0 335 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 ZNF517Q6ZMY9 492 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 FBXL6Q8N531 539 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 SFXN5Q8TD22 340 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 SLC38A1Q9H2H9 487 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 TP63Q9H3D4 680 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 FGF20Q9NP95 211 aaPredicted RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 MRPS18AQ9NVS2 196 aaKnown RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 TOR4AQ9NXH8 423 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 SF3B6Q9Y3B4 125 aaKnown RBP18.19■□□□□ 0.5
LIMS2-212ENST00000466410 UNC80Q8N2C7 3258 aa18.19■□□□□ 0.5
LIMS2-212ENST00000466410 CPSF4LA6NMK7 179 aaKnown RBP18.18■□□□□ 0.5
LIMS2-212ENST00000466410 FAM170BA6NMN3 283 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 FHP07954 510 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 PKLRP30613 574 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 CD79BP40259 229 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 ANXA11P50995 505 aaKnown RBP18.18■□□□□ 0.5
LIMS2-212ENST00000466410 RAB8AP61006 207 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 RAB40BQ12829 278 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 FGL2Q14314 439 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 PLK5Q496M5 336 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 ZNF311Q5JNZ3 666 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 BHLHB9Q6PI77 547 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 SLC36A4Q6YBV0 504 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 CLDN22Q8N7P3 220 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 GALNT6Q8NCL4 622 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 MSLNLQ96KJ4 702 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 OR7D2Q96RA2 312 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 MOV10Q9HCE1 1003 aaKnown RBP18.18■□□□□ 0.5
LIMS2-212ENST00000466410 SEMA4GQ9NTN9 838 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 NPAP1Q9NZP6 1156 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 THAP10Q9P2Z0 257 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-212ENST00000466410 SCAMP1O15126 338 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 KRT8P05787 483 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 MC3RP41968 323 aa18.18■□□□□ 0.5
LIMS2-212ENST00000466410 MTNR1AP48039 350 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms