RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 DEPPQ9NTK1 212 aa11.41□□□□□ -0.58
CHPF2-202ENST00000465601 PCNX3Q9H6A9 2034 aa11.41□□□□□ -0.58
CHPF2-202ENST00000465601 MED12Q93074 2177 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 A0A0G2JMM0 328 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 A0A1W2PPB8 328 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 A0A1W2PRS3 328 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 FRG2CA6NGY1 282 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 KIR3DP1A8MWS1 328 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 CAPN14A8MX76 684 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 KLRC4-KLRK1H3BQV0 150 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 UBDO15205 165 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 ACOX3O15254 700 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 CFLARO15519 480 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 EMC8O43402 210 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 EDF1O60869 148 aaKnown RBP11.4□□□□□ -0.58
CHPF2-202ENST00000465601 WISP2O76076 250 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 PSMG1O95456 288 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 P04436 131 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 ABCB1P08183 1280 aaPredicted RBP11.4□□□□□ -0.58
CHPF2-202ENST00000465601 CNR1P21554 472 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 IL12AP29459 219 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 RFC3P40938 356 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 MEOX1P50221 254 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 CLNS1AP54105 237 aaKnown RBP11.4□□□□□ -0.58
CHPF2-202ENST00000465601 WNT3P56703 355 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 PHC1P78364 1004 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 GUCY1A3Q02108 690 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 MLC1Q15049 377 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 NTRK2Q16620 822 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 SPANXN4Q5MJ08 99 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 SLC22A10Q63ZE4 541 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 DESI1Q6ICB0 168 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 NPSR1Q6W5P4 371 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 SZRD1Q7Z422 152 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 CAMKMTQ7Z624 323 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 SLC44A2Q8IWA5 706 aaPredicted RBP11.4□□□□□ -0.58
CHPF2-202ENST00000465601 CPSF7Q8N684 471 aaKnown RBP11.4□□□□□ -0.58
CHPF2-202ENST00000465601 GOLM1Q8NBJ4 401 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 FAM98AQ8NCA5 519 aaKnown RBP11.4□□□□□ -0.58
CHPF2-202ENST00000465601 NUP43Q8NFH3 380 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 DNAJB8Q8NHS0 232 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 OMA1Q96E52 524 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 HSPBAP1Q96EW2 488 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 BTBD9Q96Q07 612 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 BARD1Q99728 777 aaKnown RBP11.4□□□□□ -0.58
CHPF2-202ENST00000465601 CLMPQ9H6B4 373 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 C3orf14Q9HBI5 128 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 SH2D2AQ9NP31 389 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 EQTNQ9NQ60 294 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 TCF7L2Q9NQB0 619 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 OLAHQ9NV23 265 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 SNX8Q9Y5X2 465 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 TENM4Q6N022 2769 aa11.4□□□□□ -0.58
CHPF2-202ENST00000465601 SPTBN1Q01082 2364 aaKnown RBP11.4□□□□□ -0.58
CHPF2-202ENST00000465601 NCKAP5O14513 1909 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 LRRK2Q5S007 2527 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 PINLYPA6NC86 204 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 ASPDHA6ND91 283 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 E9PBE3 544 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 DYNC1I1O14576 645 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 TO15178 435 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 POLR3GO15318 223 aaPredicted RBP11.39□□□□□ -0.59
CHPF2-202ENST00000465601 REM1O75628 298 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 PPM1BO75688 479 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 CPSF4O95639 269 aaKnown RBP11.39□□□□□ -0.59
CHPF2-202ENST00000465601 CRYABP02511 175 aaKnown RBP11.39□□□□□ -0.59
CHPF2-202ENST00000465601 IFI6P09912 130 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 IDO1P14902 403 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 MST1P26927 711 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 S100A3P33764 101 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 PIGAP37287 484 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 KIR3DL1P43629 444 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 DNASE1L1P49184 302 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 DGKQP52824 942 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 PSG6Q00889 435 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 PLCXD2Q0VAA5 305 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 GAB1Q13480 694 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 GSTA3Q16772 222 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 FAM174BQ3ZCQ3 159 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 PDCD4Q53EL6 469 aaKnown RBP11.39□□□□□ -0.59
CHPF2-202ENST00000465601 RNFT1Q5M7Z0 435 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 PRAMEF20Q5VT98 475 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 ZNF324BQ6AW86 544 aaPredicted RBP11.39□□□□□ -0.59
CHPF2-202ENST00000465601 ANKRD46Q86W74 232 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 DND1Q8IYX4 353 aaKnown RBP11.39□□□□□ -0.59
CHPF2-202ENST00000465601 CLECL1Q8IZS7 167 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 SLC34A3Q8N130 599 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 OR4N2Q8NGD1 307 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 OR8J2Q8NGG1 315 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 RFWD2Q8NHY2 731 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 PAQR8Q8TEZ7 354 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 TMBIM1Q969X1 311 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 TESCQ96BS2 214 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 FAM120BQ96EK7 910 aaKnown RBP11.39□□□□□ -0.59
CHPF2-202ENST00000465601 GIMAP5Q96F15 307 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 C16orf58Q96GQ5 468 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 FRMD6Q96NE9 622 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 ZBTB18Q99592 522 aa11.39□□□□□ -0.59
CHPF2-202ENST00000465601 CCDC28BQ9BUN5 200 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms