RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 P4HA3Q7Z4N8 544 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 SLC39A11Q8N1S5 342 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 ARL14Q8N4G2 192 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 ZNF491Q8N8L2 437 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 OR4Q3Q8NH05 313 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 OR52J3Q8NH60 311 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 CCDC110Q8TBZ0 833 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 LHX4Q969G2 390 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 FAM173AQ9BQD7 235 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 TTYH2Q9BSA4 534 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 PUS3Q9BZE2 481 aaKnown RBP3.26□□□□□ -1.89
CLK1-208ENST00000464454 RWDD1Q9H446 243 aaPredicted RBP3.26□□□□□ -1.89
CLK1-208ENST00000464454 TSPY26PQ9H489 355 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 ROPN1Q9HAT0 212 aaPredicted RBP3.26□□□□□ -1.89
CLK1-208ENST00000464454 RPS10P5Q9NQ39 176 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 P2RX2Q9UBL9 471 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 MLXQ9UH92 298 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 PURGQ9UJV8 347 aaKnown RBP3.26□□□□□ -1.89
CLK1-208ENST00000464454 MGAT4BQ9UQ53 548 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.26□□□□□ -1.89
CLK1-208ENST00000464454 STYXL1Q9Y6J8 313 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 CUX2O14529 1486 aa3.26□□□□□ -1.89
CLK1-208ENST00000464454 ATP8B3O60423 1300 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 FAM230AA0A1W2PPH8 454 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 LRIT2A6NDA9 550 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 H3BTX0 84 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 PDLIM1O00151 329 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 TYROBPO43914 113 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 SH3BGRLO75368 114 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 TOM1L1O75674 476 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 NDUFA7O95182 113 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 IGSF6O95976 241 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 RRASP10301 218 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 BRCC3P46736 316 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 MFAP2P55001 183 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 MTTPP55157 894 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 IL9RQ01113 521 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 COX10Q12887 443 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 CYLC2Q14093 348 aaPredicted RBP3.25□□□□□ -1.89
CLK1-208ENST00000464454 ACER2Q5QJU3 275 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 FAM219BQ5XKK7 198 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 LEMD1Q68G75 181 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 ZNF774Q6NX45 483 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 CERS5Q8N5B7 392 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 BCORP1Q8N888 145 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 OR52B4Q8NGK2 314 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 FLVCR1-AS1Q8TAF5 88 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 GIPC3Q8TF64 312 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 PINX1Q96BK5 328 aaKnown RBP3.25□□□□□ -1.89
CLK1-208ENST00000464454 TBC1D31Q96DN5 1066 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 RPAP3Q9H6T3 665 aaPredicted RBP3.25□□□□□ -1.89
CLK1-208ENST00000464454 ECT2Q9H8V3 914 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 ADGRL4Q9HBW9 690 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 VAT1LQ9HCJ6 419 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 AMBNQ9NP70 447 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 ESM1Q9NQ30 184 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 POLE3Q9NRF9 147 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 ZNF446Q9NWS9 450 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 GDAP2Q9NXN4 497 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 GPR83Q9NYM4 423 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 MBD2Q9UBB5 411 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 DHRS7Q9Y394 339 aa3.25□□□□□ -1.89
CLK1-208ENST00000464454 KLF2Q9Y5W3 355 aaPredicted RBP3.25□□□□□ -1.89
CLK1-208ENST00000464454 A0A1B0GVY2 172 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 RGSL1A5PLK6 1076 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 ANKRD30BLA7E2S9 258 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 E2F3O00716 465 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 PDXKO00764 312 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 TOXO94900 526 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 AKR7A3O95154 331 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 RENP00797 406 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 MELTFP08582 738 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 HOXB7P09629 217 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 RFC2P35250 354 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 ELK3P41970 407 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 RPL34P49207 117 aaKnown RBP3.24□□□□□ -1.89
CLK1-208ENST00000464454 ARHGDIAP52565 204 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 HAND2P61296 217 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 MRPS6P82932 125 aaKnown RBP3.24□□□□□ -1.89
CLK1-208ENST00000464454 PDZK1IP1Q13113 114 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 SCGB2A2Q13296 93 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 ABRAXAS2Q15018 415 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 C17orf58Q2M2W7 97 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 C14orf28Q4W4Y0 310 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 HSP90AA5PQ58FG0 334 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 NHLRC3Q5JS37 347 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 BEND6Q5SZJ8 279 aaPredicted RBP3.24□□□□□ -1.89
CLK1-208ENST00000464454 GET4Q7L5D6 327 aaPredicted RBP3.24□□□□□ -1.89
CLK1-208ENST00000464454 CATSPER4Q7RTX7 472 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 NET1Q7Z628 596 aaPredicted RBP3.24□□□□□ -1.89
CLK1-208ENST00000464454 TSEN54Q7Z6J9 526 aaKnown RBP3.24□□□□□ -1.89
CLK1-208ENST00000464454 MISPQ8IVT2 679 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 SPAG16Q8N0X2 631 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 FGFRL1Q8N441 504 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 ARFGAP2Q8N6H7 521 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 OR4F17Q8NGA8 305 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 SLC25A36Q96CQ1 311 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 C16orf45Q96MC5 204 aaPredicted RBP3.24□□□□□ -1.89
CLK1-208ENST00000464454 OR4F4Q96R69 305 aa3.24□□□□□ -1.89
CLK1-208ENST00000464454 FICDQ9BVA6 458 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms