RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 ENOPH1Q9UHY7 261 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 PCDHGA10Q9Y5H3 936 aa20.38■□□□□ 0.85
PDLIM2-216ENST00000464275 AGR2O95994 175 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 HNRNPCP07910 306 aaKnown RBP eCLIP20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 CBLP22681 906 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 SMIM11AP58511 58 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 HNRNPKP61978 463 aaKnown RBP eCLIP20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 AQP6Q13520 282 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 ANKDD1AQ495B1 522 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 C6orf132Q5T0Z8 1188 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 CDC73Q6P1J9 531 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 TMEFF1Q8IYR6 380 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 OR9Q2Q8NGE9 314 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 OR4D11Q8NGI4 311 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 ADAMTS15Q8TE58 950 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 YIPF6Q96EC8 236 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 TRNT1Q96Q11 434 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 SLC38A3Q99624 504 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 NIPSNAP1Q9BPW8 284 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 PINK1Q9BXM7 581 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 ANKRA2Q9H9E1 313 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 ANKHQ9HCJ1 492 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 RHCGQ9UBD6 479 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 ACAD8Q9UKU7 415 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 TMCC3Q9ULS5 477 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 SLC9A8Q9Y2E8 581 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 SPAG17Q6Q759 2223 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 SLC9B1P1A6NJY1 282 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 STK25O00506 426 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 CASC3O15234 703 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 AQP9O43315 295 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 XPNPEP2O43895 674 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 FOXD2O60548 495 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 CAPZBP47756 277 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 MAPK10P53779 464 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 TEKQ02763 1124 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 FAM111BQ6SJ93 734 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 DEF8Q6ZN54 512 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 OLIG3Q7RTU3 272 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 C17orf82Q86X59 251 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 MCATQ8IVS2 390 aaKnown RBP20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 OR2L13Q8N349 312 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 C1orf216Q8TAB5 229 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 NMNAT1Q9HAN9 279 aaPredicted RBP20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 STARD5Q9NSY2 213 aa20.37■□□□□ 0.85
PDLIM2-216ENST00000464275 PCDH15Q96QU1 1955 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 CYR61O00622 381 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 HCRTR1O43613 425 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 SULT1C4O75897 302 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 LGI1O95970 557 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 H1F0P07305 194 aaKnown RBP20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 OCM2P0CE71 109 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 OCMP0CE72 109 aaPredicted RBP20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 GGT2P36268 569 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 RAB38P57729 211 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 DGUOKQ16854 277 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 MFSD12Q6NUT3 480 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 GPR153Q6NV75 609 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 C16orf62Q7Z3J2 963 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 P2RY8Q86VZ1 359 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 DNAJC22Q8N4W6 341 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 PCDHGA6Q9Y5G7 932 aa20.36■□□□□ 0.85
PDLIM2-216ENST00000464275 MAGEB3O15480 346 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 SRPX2O60687 465 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 SLITRK5O94991 958 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 OXSR1O95747 527 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 GPR75O95800 540 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 SHC2P98077 582 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 PIGFQ07326 219 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 DEFB110Q30KQ9 67 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 FAM214AQ32MH5 1076 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 ZNF628Q5EBL2 1059 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 MLIPQ5VWP3 458 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 HEPHL1Q6MZM0 1159 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 RBM45Q8IUH3 476 aaKnown RBP20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 LACC1Q8IV20 430 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 MINDY2Q8NBR6 621 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 OR5T3Q8NGG3 340 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 SLC35A4Q96G79 324 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 TCTN2Q96GX1 697 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 SH3YL1Q96HL8 342 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 SLC38A1Q9H2H9 487 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 ERVK-18Q9QC07 812 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 DSPPQ9NZW4 1301 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 LMO7DNF2Z398 122 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 KPNA4O00629 521 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 ALPPP05187 535 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 IFI6P09912 130 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 FUT4P22083 530 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 FMO3P31513 532 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 DCST1Q5T197 706 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 ZNF770Q6IQ21 691 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 OGFOD3Q6PK18 319 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 Q7L0L9 218 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 EGFL6Q8IUX8 553 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 CCDC71Q8IV32 467 aaPredicted RBP20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 CENPSQ8N2Z9 138 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 ARHGEF39Q8N4T4 335 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 ZNF540Q8NDQ6 660 aa20.35■□□□□ 0.85
PDLIM2-216ENST00000464275 RNF217Q8TC41 542 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms