RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 SCN3BQ9NY72 215 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 ZNF282Q9UDV7 671 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 ATP6V1HQ9UI12 483 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 SRPK3Q9UPE1 567 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 MAU2Q9Y6X3 613 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 GNG14A0A1W2PPG7 69 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 ZNF99A8MXY4 864 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 GALR3O60755 368 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 DNAJB6O75190 326 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 CLPXO76031 633 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 ANXA4P09525 319 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 LAMP1P11279 417 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 ZNF28P17035 718 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 ZNF10P21506 573 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 TPP2P29144 1249 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 GCGRP47871 477 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 AVPR1BP47901 424 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 CSNK2BP67870 215 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 IL5RAQ01344 420 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 SLAMF1Q13291 335 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 RAPSNQ13702 412 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 PUM1Q14671 1186 aaKnown RBP eCLIP16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 YOD1Q5VVQ6 348 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 SVOPQ8N4V2 548 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 SLC38A9Q8NBW4 561 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 BPIFB6Q8NFQ5 453 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 GOT1L1Q8NHS2 421 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 CDC26Q8NHZ8 85 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 MMABQ96EY8 250 aaPredicted RBP16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 DDX31Q9H8H2 851 aaKnown RBP16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 B3GNT3Q9Y2A9 372 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 U3KQV3 271 aa16.93■□□□□ 0.3
ATPAF2-202ENST00000462733 DSCR3O14972 297 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 B3GALT2O43825 422 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 TMPRSS11DO60235 418 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 RDH16O75452 317 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 TNFSF15O95150 251 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 CD247P20963 164 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 AGXTP21549 392 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 OR1D4P47884 311 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 DAPP51397 102 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 ARFIP1P53367 373 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 MAPK12P53778 367 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 GABREP78334 506 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 FOXC1Q12948 553 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 ANKRD34AQ69YU3 496 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 RHBDD2Q6NTF9 364 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 TSPYL5Q86VY4 417 aaPredicted RBP16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 CLECL1Q8IZS7 167 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 OR5T3Q8NGG3 340 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 TRUB1Q8WWH5 349 aaKnown RBP16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 TANKQ92844 425 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 SERINC2Q96SA4 455 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 FUNDC2Q9BWH2 189 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 ULBP3Q9BZM4 244 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 ROGDIQ9GZN7 287 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 RIBC2Q9H4K1 309 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 ATAD3AQ9NVI7 634 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 WARS2Q9UGM6 360 aaKnown RBP16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 ADAM29Q9UKF5 820 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 NDRG4Q9ULP0 352 aaKnown RBP16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 PADI2Q9Y2J8 665 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 SAMHD1Q9Y3Z3 626 aaKnown RBP16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 GMPPBQ9Y5P6 360 aa16.92■□□□□ 0.3
ATPAF2-202ENST00000462733 A0A0A6YYD5 115 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 A0A1B0GX78 115 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 E9PQ18 207 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 CPNE3O75131 537 aaKnown RBP16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 NSA2O95478 260 aaKnown RBP16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 CPSF4O95639 269 aaKnown RBP16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 ZNF182P17025 639 aaPredicted RBP16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 TSFMP43897 325 aaKnown RBP16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 VLDLRP98155 873 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 MAT1AQ00266 395 aaKnown RBP16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 TMEM164Q5U3C3 297 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 SLC16A12Q6ZSM3 486 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 ZC3H7AQ8IWR0 971 aaKnown RBP16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 SHISA5Q8N114 240 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 C11orf65Q8NCR3 313 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 ZFP90Q8TF47 636 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 IPCEF1Q8WWN9 437 aaPredicted RBP16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 DDA1Q9BW61 102 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 FAIMQ9NVQ4 179 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 PAK1IP1Q9NWT1 392 aaPredicted RBP16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 HCN3Q9P1Z3 774 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 KIF17Q9P2E2 1029 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 FBXW2Q9UKT8 454 aa16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 TMEM184BQ9Y519 407 aaPredicted RBP16.91■□□□□ 0.3
ATPAF2-202ENST00000462733 GABRR3A8MPY1 467 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 MYO1GB0I1T2 1018 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 C9orf172C9J069 976 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 SLC22A1O15245 554 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 SUV39H1O43463 412 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 MITFO75030 526 aaPredicted RBP16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 GABARAPO95166 117 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 HBQ1P09105 142 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 CLK3P49761 638 aaKnown RBP16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 SKP1P63208 163 aa16.9■□□□□ 0.3
ATPAF2-202ENST00000462733 SLC35A2P78381 396 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms