RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 IL1RL2Q9HB29 575 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 THUMPD1Q9NXG2 353 aaKnown RBP9.88□□□□□ -0.83
UBR4-208ENST00000459947 PRDM4Q9UKN5 801 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 PEX1O43933 1283 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 KRT75O95678 551 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 EPHA3P29320 983 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 ADSLP30566 484 aaPredicted RBP9.87□□□□□ -0.83
UBR4-208ENST00000459947 MDH1P40925 334 aaKnown RBP9.87□□□□□ -0.83
UBR4-208ENST00000459947 LTB4RQ15722 352 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 TMEM107Q6UX40 140 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 IL20RBQ6UXL0 311 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 Q8NA96 180 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 NR4A3Q92570 626 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 UCN3Q969E3 161 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 CCDC115Q96NT0 180 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 EPN3Q9H201 632 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 DUSP22Q9NRW4 184 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 ZCCHC3Q9NUD5 404 aaKnown RBP9.87□□□□□ -0.83
UBR4-208ENST00000459947 LAMP1P11279 417 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 PPIBP23284 216 aaKnown RBP9.87□□□□□ -0.83
UBR4-208ENST00000459947 ELAVL4P26378 380 aaKnown RBP9.87□□□□□ -0.83
UBR4-208ENST00000459947 TRPC1P48995 793 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 CASP6P55212 293 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 EXOSC7Q15024 291 aaKnown RBP9.87□□□□□ -0.83
UBR4-208ENST00000459947 MAPRE2Q15555 327 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 ZNF750Q32MQ0 723 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 TRMT12Q53H54 448 aaKnown RBP9.87□□□□□ -0.83
UBR4-208ENST00000459947 ZNF385BQ569K4 471 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 TMEM198Q66K66 360 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 LYPD8Q6UX82 237 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 ZNF321PQ8N8H1 164 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 OR7A2PQ8NGA2 310 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 GOT1L1Q8NHS2 421 aaPredicted RBP9.87□□□□□ -0.83
UBR4-208ENST00000459947 OMA1Q96E52 524 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 TMEM41AQ96HV5 264 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 BARD1Q99728 777 aaKnown RBP9.87□□□□□ -0.83
UBR4-208ENST00000459947 ACTRT3Q9BYD9 372 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 POLE3Q9NRF9 147 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 COL6A6A6NMZ7 2263 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 ZNF195O14628 629 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 PRKNO60260 465 aaPredicted RBP9.87□□□□□ -0.83
UBR4-208ENST00000459947 OR6B1O95007 311 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 NKX2-2O95096 273 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 CCT3P49368 545 aaKnown RBP9.87□□□□□ -0.83
UBR4-208ENST00000459947 AQP5P55064 265 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 KCNK10P57789 538 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 PLGLB1Q02325 96 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 HYAL4Q2M3T9 481 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 CDC73Q6P1J9 531 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 MTFR2Q6P444 385 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 ZFP62Q8NB50 900 aaPredicted RBP9.87□□□□□ -0.83
UBR4-208ENST00000459947 ITCHQ96J02 903 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 EXD2Q9NVH0 621 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 EPG5Q9HCE0 2579 aa9.87□□□□□ -0.83
UBR4-208ENST00000459947 ANKRD28O15084 1053 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 SLC22A2O15244 555 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 NGFRP08138 427 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 KHKP50053 298 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 IDH3AP50213 366 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 MEOX1P50221 254 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 DIO3P55073 304 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 PER3P56645 1201 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 TLE1Q04724 770 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 SF3B4Q15427 424 aaKnown RBP eCLIP9.86□□□□□ -0.831e-9■■■■■ 43.2
UBR4-208ENST00000459947 ATAD3BQ5T9A4 648 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 FAM47EQ6ZV65 393 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 GALNTL5Q7Z4T8 443 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 MISPQ8IVT2 679 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 SLC44A2Q8IWA5 706 aaPredicted RBP9.86□□□□□ -0.83
UBR4-208ENST00000459947 FAM13CQ8NE31 585 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 CATSPER1Q8NEC5 780 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 PMM1Q92871 262 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 PPP1R36Q96LQ0 422 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 NXF5Q9H1B4 397 aaKnown RBP9.86□□□□□ -0.83
UBR4-208ENST00000459947 ZBTB20Q9HC78 741 aaPredicted RBP9.86□□□□□ -0.83
UBR4-208ENST00000459947 MAP10Q9P2G4 905 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 GIMAP2Q9UG22 337 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 CBLCQ9ULV8 474 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 UPK1AO00322 258 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 ASNA1O43681 348 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 REM1O75628 298 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 VIMP08670 466 aaKnown RBP9.86□□□□□ -0.83
UBR4-208ENST00000459947 ZCCHC18P0CG32 403 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 ZNF24P17028 368 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 DUSP2Q05923 314 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 SLC9B1Q4ZJI4 515 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 MFSD12Q6NUT3 480 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 ZNF551Q7Z340 670 aaPredicted RBP9.86□□□□□ -0.83
UBR4-208ENST00000459947 OR4A15Q8NGL6 344 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 SLC35G5Q96KT7 338 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 SIGLEC12Q96PQ1 595 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 WDR55Q9H6Y2 383 aaPredicted RBP9.86□□□□□ -0.83
UBR4-208ENST00000459947 SH2D2AQ9NP31 389 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 IL33O95760 270 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 SOAT1P35610 550 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 PACS2Q86VP3 889 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 OR2M7Q8NG81 312 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 MIPOL1Q8TD10 442 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 ADAMTS15Q8TE58 950 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 CIDECQ96AQ7 238 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms