RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 LOC100506127A0A0U1RQW1 187 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 GSAPA4D1B5 854 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 SCG5P05408 212 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 DBTP11182 482 aaKnown RBP14.14□□□□□ -0.15
LDLR-202ENST00000455727 TNNI3P19429 210 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 DRD1P21728 446 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 PRKAR1BP31321 381 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 IFNGR2P38484 337 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 ACTR1BP42025 376 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 PCYT1AP49585 367 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 PSMD7P51665 324 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 ACTR1AP61163 376 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 TNFRSF17Q02223 184 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 RELAQ04206 551 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 CHRNEQ04844 493 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 SUZ12Q15022 739 aaKnown RBP14.14□□□□□ -0.15
LDLR-202ENST00000455727 RD3Q7Z3Z2 195 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 IQCHQ86VS3 1027 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 ZFPM2Q8WW38 1151 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 TSACCQ96A04 125 aaPredicted RBP14.14□□□□□ -0.15
LDLR-202ENST00000455727 OR2A5Q96R48 311 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 CENPOQ9BU64 300 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 CDADC1Q9BWV3 514 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 TRIM45Q9H8W5 580 aaPredicted RBP14.14□□□□□ -0.15
LDLR-202ENST00000455727 CHCHD3Q9NX63 227 aaKnown RBP14.14□□□□□ -0.15
LDLR-202ENST00000455727 DNAJC27Q9NZQ0 273 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 ANKMY1Q9P2S6 941 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 DAPK2Q9UIK4 370 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 FANCMQ8IYD8 2048 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 URADA6NGE7 173 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 H0Y8X5 98 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 ARHGAP33O14559 1287 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 CYP7B1O75881 506 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 MAGEA10P43363 369 aaPredicted RBP14.14□□□□□ -0.15
LDLR-202ENST00000455727 YPEL5P62699 121 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 ZNF91Q05481 1191 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 TSTQ16762 297 aaKnown RBP14.14□□□□□ -0.15
LDLR-202ENST00000455727 TPRG1LQ5T0D9 272 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 LRRC25Q8N386 305 aaPredicted RBP14.14□□□□□ -0.15
LDLR-202ENST00000455727 CCL4L1Q8NHW4 92 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 SLC6A18Q96N87 628 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 FAM210AQ96ND0 272 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 CHCHD6Q9BRQ6 235 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 TMEM168Q9H0V1 697 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 TRNAU1APQ9NX07 287 aaKnown RBP14.14□□□□□ -0.15
LDLR-202ENST00000455727 SLC13A4Q9UKG4 626 aa14.14□□□□□ -0.15
LDLR-202ENST00000455727 RANBP2P49792 3224 aaKnown RBP14.14□□□□□ -0.15
LDLR-202ENST00000455727 AGAP5A6NIR3 686 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 TPST2O60704 377 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 ENDOUP21128 410 aaKnown RBP14.13□□□□□ -0.15
LDLR-202ENST00000455727 SMSP52788 366 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 GINS1Q14691 196 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 TRAM2Q15035 370 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 GDPGP1Q6ZNW5 385 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 C16orf62Q7Z3J2 963 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 PROKR2Q8NFJ6 384 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 GNPDA2Q8TDQ7 276 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 ADAMTS15Q8TE58 950 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 FGF11Q92914 225 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 OPALINQ96PE5 141 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 MS4A4EQ96PG1 132 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 FCRL4Q96PJ5 515 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 GPA33Q99795 319 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 MND1Q9BWT6 205 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 ARMC7Q9H6L4 198 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 TVP23BQ9NYZ1 205 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 A0A087WUU8 490 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 SAGE2PA6NJ88 616 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 ALOX5P09917 674 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 CPN2P22792 545 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 IFNA8P32881 189 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 ACSL1P33121 698 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 TAS2R41P59536 307 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 SRP54P61011 504 aaKnown RBP14.13□□□□□ -0.15
LDLR-202ENST00000455727 ST3GAL3Q11203 375 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 SPHARQ15513 63 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 SSX1Q16384 188 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 FAM214AQ32MH5 1076 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 PRRT3Q5FWE3 981 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 CDC73Q6P1J9 531 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 WDR53Q7Z5U6 358 aaPredicted RBP14.13□□□□□ -0.15
LDLR-202ENST00000455727 MRGPREQ86SM8 312 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 NANOGP1Q8N7R0 232 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 OR4K14Q8NGD5 310 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 KAT2AQ92830 837 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 SLC35A4Q96G79 324 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 TSSK6Q9BXA6 273 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 QRSL1Q9H0R6 528 aaKnown RBP14.13□□□□□ -0.15
LDLR-202ENST00000455727 EQTNQ9NQ60 294 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 TRPV5Q9NQA5 729 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 KLHL28Q9NXS3 571 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 PILRAQ9UKJ1 303 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 CA5BQ9Y2D0 317 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 COL4A2P08572 1712 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 LRP4O75096 1905 aa14.13□□□□□ -0.15
LDLR-202ENST00000455727 ARHGEF17Q96PE2 2063 aaPredicted RBP14.12□□□□□ -0.15
LDLR-202ENST00000455727 ISPDA4D126 451 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 TLX2O43763 284 aaPredicted RBP14.12□□□□□ -0.15
LDLR-202ENST00000455727 PRKYO43930 277 aa14.12□□□□□ -0.15
LDLR-202ENST00000455727 UGT2B7P16662 529 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms