RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 V9GYH0 126 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 DUXAA6NLW8 204 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 CTDSP2O14595 271 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 SNPHO15079 494 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 PGRMC2O15173 223 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 PLRG1O43660 514 aaKnown RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 TLX2O43763 284 aaPredicted RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 DYRK3O43781 588 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 CYP7B1O75881 506 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 CKMT1AP12532 417 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 ALOX12P18054 663 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 TNNI3P19429 210 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 GALP22466 123 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 FPR3P25089 353 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 TNFRSF4P43489 277 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 OMPP47874 163 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 ERVK-21P61565 698 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 DUSP2Q05923 314 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 ST3GAL3Q11203 375 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 EXOSC6Q5RKV6 272 aaKnown RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 TANGO2Q6ICL3 276 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 SLC27A4Q6P1M0 643 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 SPRED2Q7Z698 418 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 AKAP14Q86UN6 197 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 PAQR7Q86WK9 346 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 NRROSQ86YC3 692 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 HDDC3Q8N4P3 179 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 SCAIQ8N9R8 606 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 POGLUT1Q8NBL1 392 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 IL17RDQ8NFM7 739 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 OR8K5Q8NH50 307 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 TRMT61AQ96FX7 289 aaKnown RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 LRR1Q96L50 414 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 OR2A14Q96R47 310 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 CNPPD1Q9BV87 410 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 ACTRT3Q9BYD9 372 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 KLHL25Q9H0H3 589 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 MTIF3Q9H2K0 278 aaKnown RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 MOV10Q9HCE1 1003 aaKnown RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 TXNL4BQ9NX01 149 aaKnown RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 OR6C2Q9NZP2 312 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 SERGEFQ9UGK8 458 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 APOBEC3BQ9UH17 382 aaKnown RBP11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 PCOLCE2Q9UKZ9 415 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 OR1A2Q9Y585 309 aa11.76□□□□□ -0.53
ECHDC1-209ENST00000454591 MDC1Q14676 2089 aaKnown RBP11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 TBC1D3KA0A087X1G2 549 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 TBC1D3FA6NER0 549 aaPredicted RBP11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 H3BQ06 376 aaPredicted RBP11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 RNGTTO60942 597 aaKnown RBP11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 OR5F1O95221 314 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 DNTTP04053 509 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 ALPPP05187 535 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 SMIM10L1P0DMW3 83 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 NR2F6P10588 404 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 SPNP16150 400 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 IFNA8P32881 189 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 IGFALSP35858 605 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 ETV5P41161 510 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 SOX3P41225 446 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 CASP3P42574 277 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 ETV1P50549 477 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 KIAA1024LP59773 190 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 RPS15AP62244 130 aaKnown RBP11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 LASP1Q14847 261 aaKnown RBP11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 LRIT3Q3SXY7 679 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 GLYR1Q49A26 553 aaPredicted RBP11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 ATAD3BQ5T9A4 648 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 TBC1D3GQ6DHY5 549 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 DESI1Q6ICB0 168 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 CCBE1Q6UXH8 406 aaPredicted RBP11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 QSOX2Q6ZRP7 698 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 ADCK2Q7Z695 626 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 UBE2Q1Q7Z7E8 422 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 FBXL6Q8N531 539 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 NUP43Q8NFH3 380 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 TEX47Q8TBZ9 253 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 ACOT11Q8WXI4 607 aaPredicted RBP11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 SMIM10Q96HG1 83 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 CEP19Q96LK0 163 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 SLC38A2Q96QD8 506 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 CTRCQ99895 268 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 APOOQ9BUR5 198 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 SRRQ9GZT4 340 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 SAP130Q9H0E3 1048 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 LMAN2LQ9H0V9 348 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 XKR8Q9H6D3 395 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 IMP3Q9NV31 184 aaKnown RBP11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 IL20Q9NYY1 176 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 TBC1D24Q9ULP9 559 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 EXOGQ9Y2C4 368 aaKnown RBP11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 CHST2Q9Y4C5 530 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 COLEC10Q9Y6Z7 277 aa11.75□□□□□ -0.53
ECHDC1-209ENST00000454591 DOCK8Q8NF50 2099 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 A0A0G2JN53 185 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 FAM170BA6NMN3 283 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 TNFSF14O43557 240 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 DLGAP3O95886 979 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 TRAPPC2P0DI81 140 aa11.74□□□□□ -0.53
ECHDC1-209ENST00000454591 TRAPPC2BP0DI82 140 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms