RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 SLC2A12Q8TD20 617 aa10.21□□□□□ -0.78
SCN9A-205ENST00000454569 SFXN5Q8TD22 340 aa10.21□□□□□ -0.78
SCN9A-205ENST00000454569 SLC35G5Q96KT7 338 aa10.21□□□□□ -0.78
SCN9A-205ENST00000454569 OR7D2Q96RA2 312 aa10.21□□□□□ -0.78
SCN9A-205ENST00000454569 B3GNT4Q9C0J1 378 aa10.21□□□□□ -0.78
SCN9A-205ENST00000454569 OR10A5Q9H207 317 aa10.21□□□□□ -0.78
SCN9A-205ENST00000454569 LIN28AQ9H9Z2 209 aaKnown RBP10.21□□□□□ -0.78
SCN9A-205ENST00000454569 C3orf14Q9HBI5 128 aa10.21□□□□□ -0.78
SCN9A-205ENST00000454569 FBXO34Q9NWN3 711 aa10.21□□□□□ -0.78
SCN9A-205ENST00000454569 PTGFRNQ9P2B2 879 aa10.21□□□□□ -0.78
SCN9A-205ENST00000454569 BCAP29Q9UHQ4 241 aa10.21□□□□□ -0.78
SCN9A-205ENST00000454569 POMPQ9Y244 141 aa10.21□□□□□ -0.78
SCN9A-205ENST00000454569 AK5Q9Y6K8 562 aa10.21□□□□□ -0.78
SCN9A-205ENST00000454569 APC2O95996 2303 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 LOC102723996A0A087X1L8 192 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 GXYLT2A0PJZ3 443 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 EVPLLA8MZ36 301 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.2□□□□□ -0.78
SCN9A-205ENST00000454569 MGRN1O60291 552 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 ZIC2O95409 532 aaPredicted RBP10.2□□□□□ -0.78
SCN9A-205ENST00000454569 RAB40ALP0C0E4 278 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 ATP6V1B2P21281 511 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 ME2P23368 584 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 FOLR3P41439 243 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 CRYBA2P53672 197 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 SYPL1Q16563 259 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 OCLNQ16625 522 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 DUSP5Q16690 384 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 SAMD4BQ5PRF9 694 aaKnown RBP10.2□□□□□ -0.78
SCN9A-205ENST00000454569 PAPD4Q6PIY7 484 aaKnown RBP10.2□□□□□ -0.78
SCN9A-205ENST00000454569 NPSR1Q6W5P4 371 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 C16orf47Q6ZP98 133 aaPredicted RBP10.2□□□□□ -0.78
SCN9A-205ENST00000454569 NET1Q7Z628 596 aaPredicted RBP10.2□□□□□ -0.78
SCN9A-205ENST00000454569 HMGN2P46Q86SG4 172 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 VASH2Q86V25 355 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 C9orf40Q8IXQ3 194 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 TRIML2Q8N7C3 387 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 APCDD1LQ8NCL9 501 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 OR4N2Q8NGD1 307 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 OR56A1Q8NGH5 318 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 FAM110BQ8TC76 370 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 PIK3R3Q92569 461 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 LMF1Q96S06 567 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 KCTD14Q9BQ13 255 aaPredicted RBP10.2□□□□□ -0.78
SCN9A-205ENST00000454569 RUBCNLQ9H714 662 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 FOLH1BQ9HBA9 442 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 CLCA3PQ9Y6N3 262 aa10.2□□□□□ -0.78
SCN9A-205ENST00000454569 HEATR5AQ86XA9 2040 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 C15orf38-AP3S2A0A0A6YYH1 394 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 ZNF354AO60765 605 aaPredicted RBP10.19□□□□□ -0.78
SCN9A-205ENST00000454569 KRT75O95678 551 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 COX6A1P12074 109 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 BMP2P12643 396 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 OTX2P32243 289 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 PLA2G5P39877 138 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 ST13P50502 369 aaKnown RBP10.19□□□□□ -0.78
SCN9A-205ENST00000454569 DSTNP60981 165 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 PRR5P85299 388 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 PSG6Q00889 435 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 NNATQ16517 81 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 FXNQ16595 210 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 RPS26P11Q5JNZ5 115 aaPredicted RBP10.19□□□□□ -0.78
SCN9A-205ENST00000454569 ATP1A1-AS1Q5TC04 95 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 CDC73Q6P1J9 531 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 CYP2R1Q6VVX0 501 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 ARPINQ7Z6K5 226 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 SERPINA11Q86U17 422 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 MICU2Q8IYU8 434 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 ANKFN1Q8N957 763 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 OR2T12Q8NG77 320 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 OR11G2Q8NGC1 345 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 NFKBIDQ8NI38 313 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 MIPOL1Q8TD10 442 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 XAGE5Q8WWM1 108 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 METTL21AQ8WXB1 218 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 SLC9A6Q92581 669 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 HOXB13Q92826 284 aaPredicted RBP10.19□□□□□ -0.78
SCN9A-205ENST00000454569 CDS1Q92903 461 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 NCLNQ969V3 563 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 FAM122AQ96E09 287 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 FBXL20Q96IG2 436 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 VSTM2LQ96N03 204 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 MS4A4EQ96PG1 132 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 ITPAQ9BY32 194 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 ACTRT3Q9BYD9 372 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 DENND2DQ9H6A0 471 aaPredicted RBP10.19□□□□□ -0.78
SCN9A-205ENST00000454569 NXT1Q9UKK6 140 aaKnown RBP10.19□□□□□ -0.78
SCN9A-205ENST00000454569 HEMK1Q9Y5R4 338 aaPredicted RBP10.19□□□□□ -0.78
SCN9A-205ENST00000454569 ACACAQ13085 2346 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 CNTRLQ7Z7A1 2325 aa10.19□□□□□ -0.78
SCN9A-205ENST00000454569 IGHV1-45A0A0A0MS14 117 aa10.18□□□□□ -0.78
SCN9A-205ENST00000454569 CDC14CA4D256 554 aa10.18□□□□□ -0.78
SCN9A-205ENST00000454569 SAGE2PA6NJ88 616 aa10.18□□□□□ -0.78
SCN9A-205ENST00000454569 TMEM200CA6NKL6 621 aa10.18□□□□□ -0.78
SCN9A-205ENST00000454569 FAM220BPB1ANY3 271 aa10.18□□□□□ -0.78
SCN9A-205ENST00000454569 TLX3O43711 291 aaPredicted RBP10.18□□□□□ -0.78
SCN9A-205ENST00000454569 TFPTP0C1Z6 253 aa10.18□□□□□ -0.78
SCN9A-205ENST00000454569 CT45A8P0DMV1 189 aa10.18□□□□□ -0.78
SCN9A-205ENST00000454569 CT45A9P0DMV2 189 aa10.18□□□□□ -0.78
SCN9A-205ENST00000454569 LIFP15018 202 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms